4qi8: Difference between revisions

No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F==
==Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F==
<StructureSection load='4qi8' size='340' side='right' caption='[[4qi8]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
<StructureSection load='4qi8' size='340' side='right'caption='[[4qi8]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4qi8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrysonilia_crassa Chrysonilia crassa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QI8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QI8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4qi8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neurospora_crassa Neurospora crassa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QI8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.1&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4qi3|4qi3]], [[4qi4|4qi4]], [[4qi5|4qi5]], [[4qi6|4qi6]], [[4qi7|4qi7]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">B10C3.010, gh61-6, ncu03328 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5141 Chrysonilia crassa])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qi8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qi8 OCA], [https://pdbe.org/4qi8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qi8 RCSB], [https://www.ebi.ac.uk/pdbsum/4qi8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qi8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qi8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qi8 OCA], [http://pdbe.org/4qi8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qi8 RCSB], [http://www.ebi.ac.uk/pdbsum/4qi8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qi8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LP9F_NEUCR LP9F_NEUCR] Lytic polysaccharide monooxygenase (LPMO) that depolymerizes crystalline and amorphous polysaccharides via the oxidation of scissile alpha- or beta-(1-4)-glycosidic bonds, yielding C1 oxidation products (PubMed:23102010, PubMed:31835532, PubMed:35080911). Catalysis by LPMOs requires the reduction of the active-site copper from Cu(II) to Cu(I) by a reducing agent and H(2)O(2) or O(2) as a cosubstrate (By similarity).[UniProtKB:Q7SHI8]<ref>PMID:23102010</ref> <ref>PMID:31835532</ref> <ref>PMID:35080911</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 21:


==See Also==
==See Also==
*[[Monooxygenase|Monooxygenase]]
*[[Monooxygenase 3D structures|Monooxygenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Chrysonilia crassa]]
[[Category: Large Structures]]
[[Category: Divne, C]]
[[Category: Neurospora crassa]]
[[Category: Gandini, R]]
[[Category: Divne C]]
[[Category: Hallberg, B M]]
[[Category: Gandini R]]
[[Category: Haltrich, D]]
[[Category: Hallberg BM]]
[[Category: Kittl, R]]
[[Category: Haltrich D]]
[[Category: Ludwig, R]]
[[Category: Kittl R]]
[[Category: Sygmund, C]]
[[Category: Ludwig R]]
[[Category: Tan, T C]]
[[Category: Sygmund C]]
[[Category: Beta-sandwich]]
[[Category: Tan TC]]
[[Category: Cellobiose dehydrogenase]]
[[Category: Cellulose]]
[[Category: Cellulose degradation]]
[[Category: Electron transfer]]
[[Category: Oxidoreductase]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA