2f84: Difference between revisions

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[[Image:2f84.gif|left|200px]]


{{Structure
==Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum==
|PDB= 2f84 |SIZE=350|CAPTION= <scene name='initialview01'>2f84</scene>, resolution 2.100&Aring;
<StructureSection load='2f84' size='340' side='right'caption='[[2f84]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
<table><tr><td colspan='2'>[[2f84]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F84 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F84 FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE= NC_004314 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 Plasmodium falciparum 3D7])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04725 OMP_decarboxylase_like]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f84 OCA], [https://pdbe.org/2f84 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f84 RCSB], [https://www.ebi.ac.uk/pdbsum/2f84 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f84 ProSAT]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2f84 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f84 OCA], [http://www.ebi.ac.uk/pdbsum/2f84 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2f84 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q8IJH3_PLAF7 Q8IJH3_PLAF7]
 
== Evolutionary Conservation ==
'''Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f8/2f84_consurf.spt"</scriptWhenChecked>
2F84 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F84 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Orotidine-5'-phosphate decarboxylase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Plasmodium falciparum 3d7]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f84 ConSurf].
[[Category: Caruthers, J M.]]
<div style="clear:both"></div>
[[Category: Hol, W G.J.]]
__TOC__
[[Category: Merritt, E A.]]
</StructureSection>
[[Category: Robein, M.]]
[[Category: Large Structures]]
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
[[Category: Plasmodium falciparum 3D7]]
[[Category: decarboxylase]]
[[Category: Caruthers JM]]
[[Category: omp]]
[[Category: Hol WGJ]]
[[Category: orotidine]]
[[Category: Merritt EA]]
[[Category: protein structure initiative]]
[[Category: Robein M]]
[[Category: psi]]
[[Category: sgpp]]
[[Category: structural genomic]]
[[Category: structural genomics of pathogenic protozoa consortium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:59:13 2008''

Latest revision as of 12:22, 30 August 2023

Crystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparumCrystal Structure of an orotidine-5'-monophosphate decarboxylase homolog from P.falciparum

Structural highlights

2f84 is a 1 chain structure with sequence from Plasmodium falciparum 3D7. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8IJH3_PLAF7

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2f84, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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