2xb9: Difference between revisions

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 ==Structure of Helicobacter pylori type II dehydroquinase in complex with inhibitor compound (2R)-2-(4-methoxybenzyl)-3-dehydroquinic acid==
-<StructureSection load='2xb9' size='340' side='right' caption='[[2xb9]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
+<StructureSection load='2xb9' size='340' side='right'caption='[[2xb9]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2xb9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XB9 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2xb9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XB9 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=XNW:(1R,2R,4S,5R)-1,4,5-TRIHYDROXY-2-(4-METHOXYBENZYL)-3-OXOCYCLOHEXANECARBOXYLIC+ACID'>XNW</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2wks|2wks]], [[2c57|2c57]], [[2c4v|2c4v]], [[1j2y|1j2y]], [[2c4w|2c4w]], [[2xb8|2xb8]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=XNW:(1R,2R,4S,5R)-1,4,5-TRIHYDROXY-2-(4-METHOXYBENZYL)-3-OXOCYCLOHEXANECARBOXYLIC+ACID'>XNW</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xb9 OCA], [https://pdbe.org/2xb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xb9 RCSB], [https://www.ebi.ac.uk/pdbsum/2xb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xb9 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xb9 OCA], [http://pdbe.org/2xb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xb9 RCSB], [http://www.ebi.ac.uk/pdbsum/2xb9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xb9 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/AROQ_HELPY AROQ_HELPY]] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]
+[https://www.uniprot.org/uniprot/AROQ_HELPY AROQ_HELPY] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 30: / Line 29: @@
 </div>
 <div class="pdbe-citations 2xb9" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: 3-dehydroquinate dehydratase]]
+[[Category: Helicobacter pylori]]
-[[Category: Atcc 43504]]
+[[Category: Large Structures]]
-[[Category: Fox, G C]]
+[[Category: Fox GC]]
-[[Category: Gonzalez-Bello, C]]
+[[Category: Gonzalez-Bello C]]
-[[Category: Llamas-Saiz, A L]]
+[[Category: Llamas-Saiz AL]]
-[[Category: Otero, J M]]
+[[Category: Otero JM]]
-[[Category: Raaij, M J.van]]
+[[Category: Tizon L]]
-[[Category: Tizon, L]]
+[[Category: Van Raaij MJ]]
-[[Category: Amino acid biosynthesis]]
-[[Category: Lyase]]