2duy: Difference between revisions

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[[Image:2duy.jpg|left|200px]]


{{Structure
==Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8==
|PDB= 2duy |SIZE=350|CAPTION= <scene name='initialview01'>2duy</scene>, resolution 1.75&Aring;
<StructureSection load='2duy' size='340' side='right'caption='[[2duy]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2duy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DUY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DUY FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
|GENE=  
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2duy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2duy OCA], [https://pdbe.org/2duy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2duy RCSB], [https://www.ebi.ac.uk/pdbsum/2duy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2duy ProSAT], [https://www.topsan.org/Proteins/RSGI/2duy TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2duy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2duy OCA], [http://www.ebi.ac.uk/pdbsum/2duy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2duy RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/2duy_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
2DUY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DUY OCA].  
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2duy ConSurf].
[[Category: Thermus thermophilus]]
<div style="clear:both"></div>
[[Category: Chen, L.]]
__TOC__
[[Category: Ebihara, A.]]
</StructureSection>
[[Category: Liu, Z J.]]
[[Category: Large Structures]]
[[Category: Niwa, H.]]
[[Category: Thet8]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Chen, L]]
[[Category: Shimada, A.]]
[[Category: Ebihara, A]]
[[Category: Wang, B C.]]
[[Category: Liu, Z J]]
[[Category: Yokoyama, S.]]
[[Category: Niwa, H]]
[[Category: helix-hairpin-helix]]
[[Category: Structural genomic]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Shimada, A]]
[[Category: nppsfa]]
[[Category: Wang, B C]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Yokoyama, S]]
[[Category: rsgi]]
[[Category: Helix-hairpin-helix]]
[[Category: structural genomic]]
[[Category: National project on protein structural and functional analyse]]
[[Category: unknown function]]
[[Category: Nppsfa]]
 
[[Category: Rsgi]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:39:50 2008''
[[Category: Unknown function]]

Latest revision as of 20:16, 15 December 2021

Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8

Structural highlights

2duy is a 1 chain structure with sequence from Thet8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2duy, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA