1kyp: Difference between revisions

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 ==Crystal Structure of an Apo Green Fluorescent Protein Zn Biosensor==
-<StructureSection load='1kyp' size='340' side='right' caption='[[1kyp]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
+<StructureSection load='1kyp' size='340' side='right'caption='[[1kyp]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1kyp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KYP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KYP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1kyp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KYP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KYP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRG:[2-(1-AMINO-2-HYDROXY-PROPYL)-4-(3H-IMIDAZOL-4-YLMETHYLENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC+ACID'>CRG</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CRG:[2-(1-AMINO-2-HYDROXY-PROPYL)-4-(3H-IMIDAZOL-4-YLMETHYLENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC+ACID'>CRG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kyr|1kyr]], [[1kys|1kys]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kyp OCA], [https://pdbe.org/1kyp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kyp RCSB], [https://www.ebi.ac.uk/pdbsum/1kyp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kyp ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kyp OCA], [http://pdbe.org/1kyp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1kyp RCSB], [http://www.ebi.ac.uk/pdbsum/1kyp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1kyp ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
+[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
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 </div>
 <div class="pdbe-citations 1kyp" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Aeqvi]]
+[[Category: Aequorea victoria]]
-[[Category: Barondeau, D P]]
+[[Category: Large Structures]]
-[[Category: Getzoff, E D]]
+[[Category: Barondeau DP]]
-[[Category: Kassmann, C J]]
+[[Category: Getzoff ED]]
-[[Category: Tainer, J A]]
+[[Category: Kassmann CJ]]
-[[Category: Apo structure]]
+[[Category: Tainer JA]]
-[[Category: Beta barrel]]
-[[Category: Chromophore]]
-[[Category: Luminescent protein]]