1hd4: Difference between revisions

No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:


==SOLUTION STRUCTURE OF THE A-SUBUNIT OF HUMAN CHORIONIC GONADOTROPIN [MODELED WITH DIANTENNARY GLYCAN AT ASN78]==
==SOLUTION STRUCTURE OF THE A-SUBUNIT OF HUMAN CHORIONIC GONADOTROPIN [MODELED WITH DIANTENNARY GLYCAN AT ASN78]==
<StructureSection load='1hd4' size='340' side='right' caption='[[1hd4]], [[NMR_Ensembles_of_Models | 26 NMR models]]' scene=''>
<StructureSection load='1hd4' size='340' side='right'caption='[[1hd4]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1hd4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HD4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1HD4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1hd4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HD4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HD4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 26 models</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1dz7|1dz7]], [[1e9j|1e9j]], [[1qfw|1qfw]], [[1xul|1xul]], [[1hrp|1hrp]], [[1hcn|1hcn]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hd4 OCA], [http://pdbe.org/1hd4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1hd4 RCSB], [http://www.ebi.ac.uk/pdbsum/1hd4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1hd4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hd4 OCA], [https://pdbe.org/1hd4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hd4 RCSB], [https://www.ebi.ac.uk/pdbsum/1hd4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hd4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GLHA_HUMAN GLHA_HUMAN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/1hd4_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hd/1hd4_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 27: Line 29:
</div>
</div>
<div class="pdbe-citations 1hd4" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1hd4" style="background-color:#fffaf0;"></div>
==See Also==
*[[Hormone|Hormone]]
*[[Human Follicle-Stimulating Hormone Complexed with its Receptor|Human Follicle-Stimulating Hormone Complexed with its Receptor]]
== References ==
== References ==
<references/>
<references/>
Line 32: Line 38:
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Boelens, R]]
[[Category: Large Structures]]
[[Category: Erbel, P J.A]]
[[Category: Boelens R]]
[[Category: Kamerling, J P]]
[[Category: Erbel PJA]]
[[Category: Karimi-Nejad, Y]]
[[Category: Kamerling JP]]
[[Category: Kuik, J A.van]]
[[Category: Karimi-Nejad Y]]
[[Category: Vliegenthart, J F.G]]
[[Category: Vliegenthart JFG]]
[[Category: Chorionic gonadotropin]]
[[Category: Van Kuik JA]]
[[Category: Glycoprotein]]
[[Category: Glycoprotein structure]]
[[Category: Hcg]]
[[Category: Xplor]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA