6bp0: Difference between revisions

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-'''Unreleased structure'''
-The entry 6bp0 is ON HOLD
+==Crystal Structure of the Human vaccinia-related kinase 1 bound to (R)-2-phenylaminopteridinone inhibitor==
+<StructureSection load='6bp0' size='340' side='right'caption='[[6bp0]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6bp0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BP0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BP0 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=E1D:(7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-5,7,8-trimethyl-7,8-dihydropteridin-6(5H)-one'>E1D</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6bp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bp0 OCA], [https://pdbe.org/6bp0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6bp0 RCSB], [https://www.ebi.ac.uk/pdbsum/6bp0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6bp0 ProSAT]</span></td></tr>
+</table>
+== Disease ==
+[https://www.uniprot.org/uniprot/VRK1_HUMAN VRK1_HUMAN] Pontocerebellar hypoplasia type 1. The disease is caused by mutations affecting the gene represented in this entry.
+== Function ==
+[https://www.uniprot.org/uniprot/VRK1_HUMAN VRK1_HUMAN] Serine/threonine kinase involved in Golgi disassembly during the cell cycle: following phosphorylation by PLK3 during mitosis, required to induce Golgi fragmentation. Acts by mediating phosphorylation of downstream target protein. Phosphorylates 'Thr-18' of p53/TP53 and may thereby prevent the interaction between p53/TP53 and MDM2. Phosphorylates casein and histone H3. Phosphorylates BANF1: disrupts its ability to bind DNA, reduces its binding to LEM domain-containing proteins and causes its relocalization from the nucleus to the cytoplasm. Phosphorylates ATF2 which activates its transcriptional activity.<ref>PMID:10951572</ref> <ref>PMID:14645249</ref> <ref>PMID:15105425</ref> <ref>PMID:16495336</ref> <ref>PMID:18617507</ref> <ref>PMID:19103756</ref>
-Authors: Counago, R.M., dos Reis, C.V., de Souza, G.P., Arruda, P., Edwards, A.M., Massirer, K.B., Elkins, J.M., Structural Genomics Consortium (SGC)
+==See Also==
+*[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]]
-Description: Crystal Structure of the Human vaccinia-related kinase 1 bound to pteridine inhibitor
+== References ==
-[[Category: Unreleased Structures]]
+<references/>
-[[Category: Elkins, J.M]]
+__TOC__
-[[Category: Edwards, A.M]]
+</StructureSection>
-[[Category: Arruda, P]]
+[[Category: Homo sapiens]]
-[[Category: Structural Genomics Consortium (Sgc)]]
+[[Category: Large Structures]]
-[[Category: Massirer, K.B]]
+[[Category: Arruda P]]
-[[Category: Counago, R.M]]
+[[Category: Azevedo A]]
-[[Category: De Souza, G.P]]
+[[Category: Counago RM]]
-[[Category: Dos Reis, C.V]]
+[[Category: Edwards AM]]
+[[Category: Elkins J]]
+[[Category: Ferreira M]]
+[[Category: Gama F]]
+[[Category: Guimaraes C]]
+[[Category: Mascarello A]]
+[[Category: Massirer KB]]
+[[Category: De Souza GP]]
+[[Category: Dos Reis CV]]