6eym: Difference between revisions

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New page: '''Unreleased structure''' The entry 6eym is ON HOLD Authors: Manzoni, F., Coates, L., Blakeley, M.P., Oksanen, E., Logan, D.T. Description: Neutron crystal structure of perdeuterated ...
 
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'''Unreleased structure'''


The entry 6eym is ON HOLD
==Neutron crystal structure of perdeuterated galectin-3C in complex with lactose==
<StructureSection load='6eym' size='340' side='right'caption='[[6eym]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6eym]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6EYM FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Hybrid , Neutron Diffraction , X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PRD_900004:beta-lactose'>PRD_900004</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6eym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6eym OCA], [https://pdbe.org/6eym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6eym RCSB], [https://www.ebi.ac.uk/pdbsum/6eym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6eym ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LEG3_HUMAN LEG3_HUMAN] Galactose-specific lectin which binds IgE. May mediate with the alpha-3, beta-1 integrin the stimulation by CSPG4 of endothelial cells migration. Together with DMBT1, required for terminal differentiation of columnar epithelial cells during early embryogenesis (By similarity). In the nucleus: acts as a pre-mRNA splicing factor. Involved in acute inflammatory responses including neutrophil activation and adhesion, chemoattraction of monocytes macrophages, opsonization of apoptotic neutrophils, and activation of mast cells.<ref>PMID:15181153</ref> <ref>PMID:19594635</ref> <ref>PMID:19616076</ref>


Authors: Manzoni, F., Coates, L., Blakeley, M.P., Oksanen, E., Logan, D.T.
==See Also==
 
*[[Galectin 3D structures|Galectin 3D structures]]
Description: Neutron crystal structure of perdeuterated galectin-3C in complex with lactose
== References ==
[[Category: Unreleased Structures]]
<references/>
[[Category: Logan, D.T]]
__TOC__
[[Category: Blakeley, M.P]]
</StructureSection>
[[Category: Oksanen, E]]
[[Category: Homo sapiens]]
[[Category: Coates, L]]
[[Category: Large Structures]]
[[Category: Manzoni, F]]
[[Category: Blakeley MP]]
[[Category: Coates L]]
[[Category: Logan DT]]
[[Category: Manzoni F]]
[[Category: Oksanen E]]

Latest revision as of 10:31, 1 May 2024

Neutron crystal structure of perdeuterated galectin-3C in complex with lactoseNeutron crystal structure of perdeuterated galectin-3C in complex with lactose

Structural highlights

6eym is a 1 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Hybrid , Neutron Diffraction , X-ray diffraction, Resolution 1.7Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LEG3_HUMAN Galactose-specific lectin which binds IgE. May mediate with the alpha-3, beta-1 integrin the stimulation by CSPG4 of endothelial cells migration. Together with DMBT1, required for terminal differentiation of columnar epithelial cells during early embryogenesis (By similarity). In the nucleus: acts as a pre-mRNA splicing factor. Involved in acute inflammatory responses including neutrophil activation and adhesion, chemoattraction of monocytes macrophages, opsonization of apoptotic neutrophils, and activation of mast cells.[1] [2] [3]

See Also

References

  1. ↑ Fukushi J, Makagiansar IT, Stallcup WB. NG2 proteoglycan promotes endothelial cell motility and angiogenesis via engagement of galectin-3 and alpha3beta1 integrin. Mol Biol Cell. 2004 Aug;15(8):3580-90. Epub 2004 Jun 4. PMID:15181153 doi:http://dx.doi.org/10.1091/mbc.E04-03-0236
  2. ↑ Henderson NC, Sethi T. The regulation of inflammation by galectin-3. Immunol Rev. 2009 Jul;230(1):160-71. doi: 10.1111/j.1600-065X.2009.00794.x. PMID:19594635 doi:10.1111/j.1600-065X.2009.00794.x
  3. ↑ Haudek KC, Spronk KJ, Voss PG, Patterson RJ, Wang JL, Arnoys EJ. Dynamics of galectin-3 in the nucleus and cytoplasm. Biochim Biophys Acta. 2010 Feb;1800(2):181-189. Epub 2009 Jul 16. PMID:19616076 doi:S0304-4165(09)00194-9

6eym, resolution 1.70Å

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