2ah5: Difference between revisions

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OCA

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-[[Image:2ah5.gif|left|200px]]
- {{Structure
+==Hydrolase, haloacid dehalogenase-like family protein SP0104 from Streptococcus pneumoniae==
-|PDB= 2ah5 |SIZE=350|CAPTION= <scene name='initialview01'>2ah5</scene>, resolution 1.74&Aring;
+<StructureSection load='2ah5' size='340' side='right'caption='[[2ah5]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+<table><tr><td colspan='2'>[[2ah5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AH5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AH5 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
-|GENE= SP0104 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 Streptococcus pneumoniae])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0546 Gph]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ah5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ah5 OCA], [https://pdbe.org/2ah5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ah5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ah5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ah5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ah5 TOPSAN]</span></td></tr>
-|RELATEDENTRY=
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ah5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ah5 OCA], [http://www.ebi.ac.uk/pdbsum/2ah5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ah5 RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/A0A0H2UN22_STRPN A0A0H2UN22_STRPN]
+== Evolutionary Conservation ==
-'''Hydrolase, haloacid dehalogenase-like family protein SP0104 from Streptococcus pneumoniae'''
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/2ah5_consurf.spt"</scriptWhenChecked>
-AH5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AH5 OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Streptococcus pneumoniae]]
+  </jmolCheckbox>
-[[Category: Abdullah, J.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ah5 ConSurf].
-[[Category: Binkowski, T A.]]
+<div style="clear:both"></div>
-[[Category: Collart, F.]]
+__TOC__
-[[Category: Joachimiak, A.]]
+</StructureSection>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Large Structures]]
-[[Category: Mcsg]]
+[[Category: Streptococcus pneumoniae TIGR4]]
-[[Category: Zhou, M.]]
+[[Category: Abdullah J]]
-[[Category: haloacid dehalogenase-like]]
+[[Category: Binkowski TA]]
-[[Category: hydrolase]]
+[[Category: Collart F]]
-[[Category: mcsg]]
+[[Category: Joachimiak A]]
-[[Category: midwest center for structural genomic]]
+[[Category: MCSG]]
-[[Category: protein structure initiative]]
+[[Category: Zhou M]]
-[[Category: psi]]
-[[Category: streptococcus pneumoniae]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:52:33 2008''