3kr9: Difference between revisions

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==Crystal structure of Streptococcus pneumoniae Sp1610, a putative tRNA (m1A22) methyltransferase==
==Crystal structure of Streptococcus pneumoniae Sp1610, a putative tRNA (m1A22) methyltransferase==
<StructureSection load='3kr9' size='340' side='right' caption='[[3kr9]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3kr9' size='340' side='right'caption='[[3kr9]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3kr9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"diplococcus_pneumoniae"_(klein_1884)_weichselbaum_1886 "diplococcus pneumoniae" (klein 1884) weichselbaum 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KR9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KR9 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3kr9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KR9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KR9 FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ku1|3ku1]]</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SP_1610 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 "Diplococcus pneumoniae" (Klein 1884) Weichselbaum 1886])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kr9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kr9 OCA], [https://pdbe.org/3kr9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kr9 RCSB], [https://www.ebi.ac.uk/pdbsum/3kr9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kr9 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.217, 2.1.1.218, 2.1.1.219 and 2.1.1.220 2.1.1.217, 2.1.1.218, 2.1.1.219 and 2.1.1.220] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kr9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kr9 OCA], [http://pdbe.org/3kr9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kr9 RCSB], [http://www.ebi.ac.uk/pdbsum/3kr9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kr9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H2UR54_STRPN A0A0H2UR54_STRPN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kr/3kr9_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kr/3kr9_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 19: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kr9 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kr9 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[SAM-dependent methyltrasferase 3D structures|SAM-dependent methyltrasferase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Transferase]]
[[Category: Large Structures]]
[[Category: Kim, K K]]
[[Category: Streptococcus pneumoniae]]
[[Category: Ta, M H]]
[[Category: Kim KK]]
[[Category: Class i rossmann-like methyltransferase fold]]
[[Category: Ta MH]]
[[Category: Methyltransferase]]

Latest revision as of 11:30, 20 March 2024

Crystal structure of Streptococcus pneumoniae Sp1610, a putative tRNA (m1A22) methyltransferaseCrystal structure of Streptococcus pneumoniae Sp1610, a putative tRNA (m1A22) methyltransferase

Structural highlights

3kr9 is a 1 chain structure with sequence from Streptococcus pneumoniae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A0H2UR54_STRPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3kr9, resolution 2.00Å

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OCA
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