2nxn: Difference between revisions

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OCA

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 ==T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11==
-<StructureSection load='2nxn' size='340' side='right' caption='[[2nxn]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+<StructureSection load='2nxn' size='340' side='right'caption='[[2nxn]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2nxn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NXN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NXN FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2nxn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NXN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NXN FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ufk|1ufk]], [[2nxc|2nxc]], [[2nxe|2nxe]], [[2nxj|2nxj]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">prmA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8]), rplK, rpl11 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nxn OCA], [https://pdbe.org/2nxn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nxn RCSB], [https://www.ebi.ac.uk/pdbsum/2nxn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nxn ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nxn OCA], [http://pdbe.org/2nxn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2nxn RCSB], [http://www.ebi.ac.uk/pdbsum/2nxn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2nxn ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PRMA_THET8 PRMA_THET8]] Methylates ribosomal protein L11; this reaction probably occurs before the protein is assembled into the ribosome. This function is dispensable for growth and thermostability. [[http://www.uniprot.org/uniprot/RL11_THETH RL11_THETH]] This protein binds directly to 23S ribosomal RNA (By similarity).
+[https://www.uniprot.org/uniprot/PRMA_THET8 PRMA_THET8] Methylates ribosomal protein L11; this reaction probably occurs before the protein is assembled into the ribosome. This function is dispensable for growth and thermostability.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/2nxn_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/2nxn_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 29: / Line 28: @@
 </div>
 <div class="pdbe-citations 2nxn" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Ribosomal protein L11 3D structures|Ribosomal protein L11 3D structures]]
+*[[Ribosomal protein L11 methyltransferase|Ribosomal protein L11 methyltransferase]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Thet8]]
+[[Category: Large Structures]]
-[[Category: Dahlberg, A E]]
+[[Category: Thermus thermophilus HB8]]
-[[Category: Demirci, H]]
+[[Category: Dahlberg AE]]
-[[Category: Gregory, S T]]
+[[Category: Demirci H]]
-[[Category: Jogl, G]]
+[[Category: Gregory ST]]
-[[Category: Post-translational modification]]
+[[Category: Jogl G]]
-[[Category: S-adenosyl-l-methionine dependent methyltransferase]]
-[[Category: Transferase]]