1jtp: Difference between revisions

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 ==Degenerate interfaces in antigen-antibody complexes==
-<StructureSection load='1jtp' size='340' side='right' caption='[[1jtp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+<StructureSection load='1jtp' size='340' side='right'caption='[[1jtp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1jtp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabian_camel Arabian camel] and [http://en.wikipedia.org/wiki/Common_turkey Common turkey]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JTP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JTP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1jtp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Camelus_dromedarius Camelus dromedarius] and [https://en.wikipedia.org/wiki/Meleagris_gallopavo Meleagris gallopavo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JTP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1mel|1mel]], [[1jto|1jto]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jtp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jtp OCA], [https://pdbe.org/1jtp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jtp RCSB], [https://www.ebi.ac.uk/pdbsum/1jtp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jtp ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jtp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jtp OCA], [http://pdbe.org/1jtp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jtp RCSB], [http://www.ebi.ac.uk/pdbsum/1jtp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1jtp ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/LYSC_MELGA LYSC_MELGA]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.
+[https://www.uniprot.org/uniprot/LYSC_MELGA LYSC_MELGA] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/1jtp_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/1jtp_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 32: / Line 31: @@
 ==See Also==
+*[[Antibody 3D structures|Antibody 3D structures]]
 *[[Lysozyme 3D structures|Lysozyme 3D structures]]
-*[[3D structures of antibody|3D structures of antibody]]
+*[[3D structures of non-human antibody|3D structures of non-human antibody]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Arabian camel]]
+[[Category: Camelus dromedarius]]
-[[Category: Common turkey]]
+[[Category: Large Structures]]
-[[Category: Lysozyme]]
+[[Category: Meleagris gallopavo]]
-[[Category: Decanniere, K]]
+[[Category: Decanniere K]]
-[[Category: Desmyter, A]]
+[[Category: Desmyter A]]
-[[Category: Maes, D]]
+[[Category: Maes D]]
-[[Category: Muyldermans, S]]
+[[Category: Muyldermans S]]
-[[Category: Transue, T R]]
+[[Category: Transue TR]]
-[[Category: Wyns, L]]
+[[Category: Wyns L]]
-[[Category: Antibody]]
-[[Category: Heavy chain antibody]]
-[[Category: Hydrolase]]
-[[Category: Immunoglobulin]]
-[[Category: Interface]]
-[[Category: Vhh]]