1xi9: Difference between revisions

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[[Image:1xi9.jpg|left|200px]]


{{Structure
==Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001==
|PDB= 1xi9 |SIZE=350|CAPTION= <scene name='initialview01'>1xi9</scene>, resolution 2.33&Aring;
<StructureSection load='1xi9' size='340' side='right'caption='[[1xi9]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5&#39;-PHOSPHATE'>PLP</scene>
<table><tr><td colspan='2'>[[1xi9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XI9 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.33&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK09265 PRK09265], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK08363 PRK08363]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xi9 OCA], [https://pdbe.org/1xi9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xi9 RCSB], [https://www.ebi.ac.uk/pdbsum/1xi9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xi9 ProSAT], [https://www.topsan.org/Proteins/SECSG/1xi9 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xi9 OCA], [http://www.ebi.ac.uk/pdbsum/1xi9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1xi9 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q9P9M8_9EURY Q9P9M8_9EURY]
 
== Evolutionary Conservation ==
'''Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/1xi9_consurf.spt"</scriptWhenChecked>
1XI9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XI9 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Pyrococcus furiosus dsm 3638]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Adams, M W.W.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xi9 ConSurf].
[[Category: Brereton, P S.]]
<div style="clear:both"></div>
[[Category: Chang, S H.]]
__TOC__
[[Category: Chen, L.]]
</StructureSection>
[[Category: II, F L.Poole.]]
[[Category: Large Structures]]
[[Category: III, W B.Arendall.]]
[[Category: Pyrococcus furiosus DSM 3638]]
[[Category: Izumi, M.]]
[[Category: Adams MWW]]
[[Category: Jr., F E.Jenney.]]
[[Category: Arendall III WB]]
[[Category: Lee, D.]]
[[Category: Brereton PS]]
[[Category: Lee, H S.]]
[[Category: Chang S-H]]
[[Category: Lin, D.]]
[[Category: Chen L]]
[[Category: Liu, Z J.]]
[[Category: Izumi M]]
[[Category: Richardson, D C.]]
[[Category: Jenney Jr FE]]
[[Category: Richardson, J S.]]
[[Category: Lee D]]
[[Category: Rose, J P.]]
[[Category: Lee H-S]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Lin D]]
[[Category: Shah, A.]]
[[Category: Liu Z-J]]
[[Category: Shah, C.]]
[[Category: Poole II FL]]
[[Category: Sugar, F J.]]
[[Category: Richardson DC]]
[[Category: Tempel, W.]]
[[Category: Richardson JS]]
[[Category: Wang, B C.]]
[[Category: Rose JP]]
[[Category: Zhou, W.]]
[[Category: Shah A]]
[[Category: alanine aminotransferase]]
[[Category: Shah C]]
[[Category: hyperthermophile]]
[[Category: Sugar FJ]]
[[Category: protein structure initiative]]
[[Category: Tempel W]]
[[Category: psi]]
[[Category: Wang B-C]]
[[Category: pyrococcus furiosus]]
[[Category: Zhou W]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:50:03 2008''

Latest revision as of 09:45, 23 August 2023

Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001

Structural highlights

1xi9 is a 4 chain structure with sequence from Pyrococcus furiosus DSM 3638. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.33Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9P9M8_9EURY

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1xi9, resolution 2.33Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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