1hek: Difference between revisions

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OCA

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 ==Crystal structure of equine infectious anaemia virus matrix antigen (EIAV MA)==
-<StructureSection load='1hek' size='340' side='right' caption='[[1hek]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+<StructureSection load='1hek' size='340' side='right'caption='[[1hek]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1hek]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HEK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1HEK FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1hek]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Equine_infectious_anemia_virus Equine infectious anemia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HEK FirstGlance]. <br>
-</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1eia|1eia]], [[2eia|2eia]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hek OCA], [http://pdbe.org/1hek PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1hek RCSB], [http://www.ebi.ac.uk/pdbsum/1hek PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1hek ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hek OCA], [https://pdbe.org/1hek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hek RCSB], [https://www.ebi.ac.uk/pdbsum/1hek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hek ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/GAG_EIAVY GAG_EIAVY] Matrix protein p15 forms the outer shell of the core of the virus, lining the inner surface of the viral membrane (By similarity).  Capsid protein p26 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity).  Nucleocapsid protein p11 encapsulates and protects viral dimeric unspliced (genomic) RNA. Binds these RNAs through its zinc fingers (By similarity).  p9 plays a role in budding of the assembled particle by interacting with PDCD6IP/AIP1 (By similarity).
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 21: @@
 ==See Also==
-*[[Gag polyprotein|Gag polyprotein]]
+*[[Gag polyprotein 3D structures|Gag polyprotein 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Fry, E]]
+[[Category: Equine infectious anemia virus]]
-[[Category: Hatanaka, H]]
+[[Category: Large Structures]]
-[[Category: Iourin, O]]
+[[Category: Fry E]]
-[[Category: Kingsman, A]]
+[[Category: Hatanaka H]]
-[[Category: Rao, Z]]
+[[Category: Iourin O]]
-[[Category: Stuart, D I]]
+[[Category: Kingsman A]]
-[[Category: Membrane-binding switching]]
+[[Category: Rao Z]]
-[[Category: Viral protein]]
+[[Category: Stuart DI]]