5mxj: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Structure of the Y108F mutant of vanillyl alcohol oxidase==
-<StructureSection load='5mxj' size='340' side='right' caption='[[5mxj]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+<StructureSection load='5mxj' size='340' side='right'caption='[[5mxj]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5mxj]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MXJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MXJ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5mxj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Penicillium_simplicissimum Penicillium simplicissimum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MXJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MXJ FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Vanillyl-alcohol_oxidase Vanillyl-alcohol oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.3.38 1.1.3.38] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mxj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mxj OCA], [http://pdbe.org/5mxj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mxj RCSB], [http://www.ebi.ac.uk/pdbsum/5mxj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mxj ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mxj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mxj OCA], [https://pdbe.org/5mxj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mxj RCSB], [https://www.ebi.ac.uk/pdbsum/5mxj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mxj ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/VAOX_PENSI VAOX_PENSI]] Catalyzes the conversion of vanillin alcohol to vanillin, and also the conversion of a wide range of phenolic compounds bearing side chains of variable size at the para position of the aromatic ring. Crucial for the degradation of the secondary metabolites derived from the degradation of the lignin. Catalyzes besides the oxidation of 4-hydroxybenzyl alcohols, the oxidative deamination of 4-hydroxybenzylamines, the oxidative demethylation of 4-(methoxy-methyl)phenols and the oxidative hydration of 4-allylphenols. Most active with 4-allylphenols.
+[https://www.uniprot.org/uniprot/VAOX_PENSI VAOX_PENSI] Catalyzes the conversion of vanillin alcohol to vanillin, and also the conversion of a wide range of phenolic compounds bearing side chains of variable size at the para position of the aromatic ring. Crucial for the degradation of the secondary metabolites derived from the degradation of the lignin. Catalyzes besides the oxidation of 4-hydroxybenzyl alcohols, the oxidative deamination of 4-hydroxybenzylamines, the oxidative demethylation of 4-(methoxy-methyl)phenols and the oxidative hydration of 4-allylphenols. Most active with 4-allylphenols.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 19: / Line 19: @@
 </div>
 <div class="pdbe-citations 5mxj" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Vanillyl-alcohol oxidase|Vanillyl-alcohol oxidase]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Vanillyl-alcohol oxidase]]
+[[Category: Large Structures]]
-[[Category: Allan, R C]]
+[[Category: Penicillium simplicissimum]]
-[[Category: Berkel, W J.H van]]
+[[Category: Allan RC]]
-[[Category: Binda, C]]
+[[Category: Binda C]]
-[[Category: Ewing, T A]]
+[[Category: Ewing TA]]
-[[Category: Fraaije, M W]]
+[[Category: Fraaije MW]]
-[[Category: Guzman, E Romero]]
+[[Category: Gygli G]]
-[[Category: Gygli, G]]
+[[Category: Mattevi A]]
-[[Category: Mattevi, A]]
+[[Category: Nguyen Q-T]]
-[[Category: Nguyen, Q T]]
+[[Category: Romero E]]
-[[Category: Oxidoreductase]]
+[[Category: Van Berkel WJH]]
-[[Category: Vanillyl alcohol oxidase]]
-[[Category: Y108f mutant]]