5lbd: Difference between revisions

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 ==Crystal structure of the N-domain of HMA6, a copper-transporting P-type ATPase==
-<StructureSection load='5lbd' size='340' side='right' caption='[[5lbd]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+<StructureSection load='5lbd' size='340' side='right'caption='[[5lbd]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5lbd]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LBD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LBD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5lbd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LBD FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cu(+)_exporting_ATPase Cu(+) exporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.54 3.6.3.54] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lbd OCA], [https://pdbe.org/5lbd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lbd RCSB], [https://www.ebi.ac.uk/pdbsum/5lbd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lbd ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lbd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lbd OCA], [http://pdbe.org/5lbd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lbd RCSB], [http://www.ebi.ac.uk/pdbsum/5lbd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lbd ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/HMA6_ARATH HMA6_ARATH]] Mediates copper transfer across the plastid envelope. Required for the delivery of copper into the plastid stroma, which is essential for the function of copper proteins. Seems to be selective for monovalent copper Cu(+) transport. Plays also a role in glucose signaling-mediated cell proliferation of root meristem in non-green tissues.<ref>PMID:12782727</ref> <ref>PMID:15772282</ref> <ref>PMID:21878617</ref> <ref>PMID:14593172</ref>
+[https://www.uniprot.org/uniprot/HMA6_ARATH HMA6_ARATH] Mediates copper transfer across the plastid envelope. Required for the delivery of copper into the plastid stroma, which is essential for the function of copper proteins. Seems to be selective for monovalent copper Cu(+) transport. Plays also a role in glucose signaling-mediated cell proliferation of root meristem in non-green tissues.<ref>PMID:12782727</ref> <ref>PMID:15772282</ref> <ref>PMID:21878617</ref> <ref>PMID:14593172</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 19: @@
 </div>
 <div class="pdbe-citations 5lbd" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[ATPase 3D structures|ATPase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Mayerhofer, H]]
+[[Category: Arabidopsis thaliana]]
-[[Category: Pebay-Peyroula, E]]
+[[Category: Large Structures]]
-[[Category: Ravaud, S]]
+[[Category: Mayerhofer H]]
-[[Category: Chloroplast]]
+[[Category: Pebay-Peyroula E]]
-[[Category: Copper transporter]]
+[[Category: Ravaud S]]
-[[Category: Hydrolase]]
-[[Category: Inner membrane]]
-[[Category: Membrane protein]]
-[[Category: P-type atpase]]