5vy8: Difference between revisions

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==S. cerevisiae Hsp104-ADP complex==
==S. cerevisiae Hsp104-ADP complex==
<StructureSection load='5vy8' size='340' side='right' caption='[[5vy8]], [[Resolution|resolution]] 4.00&Aring;' scene=''>
<SX load='5vy8' size='340' side='right' viewer='molstar' caption='[[5vy8]], [[Resolution|resolution]] 5.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5vy8]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VY8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VY8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5vy8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VY8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VY8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 5.6&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5vy9|5vy9]], [[5vya|5vya]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vy8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vy8 OCA], [http://pdbe.org/5vy8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vy8 RCSB], [http://www.ebi.ac.uk/pdbsum/5vy8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vy8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vy8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vy8 OCA], [https://pdbe.org/5vy8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vy8 RCSB], [https://www.ebi.ac.uk/pdbsum/5vy8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vy8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/HS104_YEAST HS104_YEAST]] Required, in concert with Hsp40 (YDJ1) and Hsp70 (SSA1) and small Hsps (HSP26), for the dissociation, resolubilization and refolding of aggregates of damaged proteins after heat or other environmental stresses. Extracts proteins from aggregates by unfolding and threading them in an ATP-dependent process through the axial channel of the protein hexamer, after which they can be refolded by components of the Hsp70/Hsp40 chaperone system. Substrate binding is ATP-dependent, and release of bound polypeptide is triggered by ATP hydrolysis. Also responsible for the maintenance of prions by dissociating prion fibrils into smaller oligomers, thereby producing transmissible seeds that can infect daughter cells during mitosis and meiosis. Loss of HSP104 can cure yeast cells of the prions [PSI+], [URE3] and [PIN+]. Excess HSP104 can also specifically cure cells of [PSI+].<ref>PMID:10678178</ref> <ref>PMID:11073991</ref> <ref>PMID:11375656</ref> <ref>PMID:11442834</ref> <ref>PMID:12101251</ref> <ref>PMID:14507919</ref> <ref>PMID:15128736</ref> <ref>PMID:15155912</ref> <ref>PMID:15843375</ref> <ref>PMID:15845535</ref> <ref>PMID:1600951</ref> <ref>PMID:16570324</ref> <ref>PMID:16885031</ref> <ref>PMID:17253904</ref> <ref>PMID:17259993</ref> <ref>PMID:17367387</ref> <ref>PMID:17543332</ref> <ref>PMID:18312264</ref> <ref>PMID:2188365</ref> <ref>PMID:7754373</ref> <ref>PMID:7984243</ref> <ref>PMID:8407824</ref> <ref>PMID:8643570</ref> <ref>PMID:9534180</ref> <ref>PMID:9674429</ref>
[https://www.uniprot.org/uniprot/HS104_YEAST HS104_YEAST] Required, in concert with Hsp40 (YDJ1) and Hsp70 (SSA1) and small Hsps (HSP26), for the dissociation, resolubilization and refolding of aggregates of damaged proteins after heat or other environmental stresses. Extracts proteins from aggregates by unfolding and threading them in an ATP-dependent process through the axial channel of the protein hexamer, after which they can be refolded by components of the Hsp70/Hsp40 chaperone system. Substrate binding is ATP-dependent, and release of bound polypeptide is triggered by ATP hydrolysis. Also responsible for the maintenance of prions by dissociating prion fibrils into smaller oligomers, thereby producing transmissible seeds that can infect daughter cells during mitosis and meiosis. Loss of HSP104 can cure yeast cells of the prions [PSI+], [URE3] and [PIN+]. Excess HSP104 can also specifically cure cells of [PSI+].<ref>PMID:10678178</ref> <ref>PMID:11073991</ref> <ref>PMID:11375656</ref> <ref>PMID:11442834</ref> <ref>PMID:12101251</ref> <ref>PMID:14507919</ref> <ref>PMID:15128736</ref> <ref>PMID:15155912</ref> <ref>PMID:15843375</ref> <ref>PMID:15845535</ref> <ref>PMID:1600951</ref> <ref>PMID:16570324</ref> <ref>PMID:16885031</ref> <ref>PMID:17253904</ref> <ref>PMID:17259993</ref> <ref>PMID:17367387</ref> <ref>PMID:17543332</ref> <ref>PMID:18312264</ref> <ref>PMID:2188365</ref> <ref>PMID:7754373</ref> <ref>PMID:7984243</ref> <ref>PMID:8407824</ref> <ref>PMID:8643570</ref> <ref>PMID:9534180</ref> <ref>PMID:9674429</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5vy8" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5vy8" style="background-color:#fffaf0;"></div>
==See Also==
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</SX>
[[Category: Buell, C E]]
[[Category: Large Structures]]
[[Category: Chuang, E]]
[[Category: Saccharomyces cerevisiae S288C]]
[[Category: Gates, S N]]
[[Category: Buell CE]]
[[Category: Jackrel, M E]]
[[Category: Chuang E]]
[[Category: Kendsersky, N M]]
[[Category: Gates SN]]
[[Category: Lin, J B]]
[[Category: Jackrel ME]]
[[Category: Mack, K L]]
[[Category: Kendsersky NM]]
[[Category: Rizo, A N]]
[[Category: Lin J-B]]
[[Category: Shorter, J]]
[[Category: Mack KL]]
[[Category: Southworth, D R]]
[[Category: Rizo AN]]
[[Category: Su, M]]
[[Category: Shorter J]]
[[Category: Sweeny, E A]]
[[Category: Southworth DR]]
[[Category: Torrente, M P]]
[[Category: Su M]]
[[Category: Yokom, A L]]
[[Category: Sweeny EA]]
[[Category: Aaa+]]
[[Category: Torrente MP]]
[[Category: Chaperone]]
[[Category: Yokom AL]]
[[Category: Cryoem]]
[[Category: Hsp104]]

Latest revision as of 12:53, 25 December 2024

S. cerevisiae Hsp104-ADP complexS. cerevisiae Hsp104-ADP complex

5vy8, resolution 5.60Å

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