1vgg: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1vgg.gif|left|200px]]


{{Structure
==Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8==
|PDB= 1vgg |SIZE=350|CAPTION= <scene name='initialview01'>1vgg</scene>, resolution 1.75&Aring;
<StructureSection load='1vgg' size='340' side='right'caption='[[1vgg]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1vgg]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VGG FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vgg OCA], [https://pdbe.org/1vgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vgg RCSB], [https://www.ebi.ac.uk/pdbsum/1vgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vgg ProSAT], [https://www.topsan.org/Proteins/RSGI/1vgg TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vgg OCA], [http://www.ebi.ac.uk/pdbsum/1vgg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1vgg RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q5SJC3_THET8 Q5SJC3_THET8]
 
== Evolutionary Conservation ==
'''Crystal Structure of the Conserved Hypothetical Protein TT1634 from Thermus Thermophilus HB8'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vg/1vgg_consurf.spt"</scriptWhenChecked>
1VGG is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VGG OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Protein complex]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Thermus thermophilus]]
  </jmolCheckbox>
[[Category: Ebihara, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vgg ConSurf].
[[Category: Kousumi, Y.]]
<div style="clear:both"></div>
[[Category: Kuramitsu, S.]]
__TOC__
[[Category: Matsumoto, K.]]
</StructureSection>
[[Category: Okamoto, A.]]
[[Category: Large Structures]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Satoh, S.]]
[[Category: Ebihara A]]
[[Category: Tanaka, I.]]
[[Category: Kousumi Y]]
[[Category: Yao, M.]]
[[Category: Kuramitsu S]]
[[Category: Yokoyama, S.]]
[[Category: Matsumoto K]]
[[Category: conserved hypothetical protein]]
[[Category: Okamoto A]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Satoh S]]
[[Category: rsgi]]
[[Category: Tanaka I]]
[[Category: structural genomic]]
[[Category: Yao M]]
[[Category: thermus thermophilus hb8]]
[[Category: Yokoyama S]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:24:08 2008''

Latest revision as of 03:36, 21 November 2024

Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8

Structural highlights

1vgg is a 6 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SJC3_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vgg, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1vgg&oldid=4202669"