5tt6: Difference between revisions

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OCA

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 ==T4 RNA Ligase 1 (K99M)==
-<StructureSection load='5tt6' size='340' side='right' caption='[[5tt6]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
+<StructureSection load='5tt6' size='340' side='right'caption='[[5tt6]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5tt6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TT6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TT6 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5tt6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TT6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TT6 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.187&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5tt5|5tt5]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/RNA_ligase_(ATP) RNA ligase (ATP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.5.1.3 6.5.1.3] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5tt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tt6 OCA], [https://pdbe.org/5tt6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5tt6 RCSB], [https://www.ebi.ac.uk/pdbsum/5tt6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5tt6 ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tt6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tt6 OCA], [http://pdbe.org/5tt6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tt6 RCSB], [http://www.ebi.ac.uk/pdbsum/5tt6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tt6 ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/RLIG_BPT4 RLIG_BPT4]] Involved in countering a host defense mechanism which activates T4-induced anticodon nuclease and shuts off viral translation. Repairs 5'-PO4 and 3'-OH groups in tRNA(Lys).<ref>PMID:2444436</ref>
+[https://www.uniprot.org/uniprot/RLIG_BPT4 RLIG_BPT4] Involved in countering a host defense mechanism which activates T4-induced anticodon nuclease and shuts off viral translation. Repairs 5'-PO4 and 3'-OH groups in tRNA(Lys).<ref>PMID:2444436</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 20: / Line 19: @@
 </div>
 <div class="pdbe-citations 5tt6" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[RNA ligase|RNA ligase]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Goldgur, Y]]
+[[Category: Escherichia virus T4]]
-[[Category: Shuman, S H]]
+[[Category: Large Structures]]
-[[Category: Unciuleac, M C]]
+[[Category: Goldgur Y]]
-[[Category: Covalent nucleotidyltransferase]]
+[[Category: Shuman SH]]
-[[Category: Ligase]]
+[[Category: Unciuleac M-C]]
-[[Category: Lysyl-amp]]
-[[Category: Metal catalysis]]