4jz1: Difference between revisions

No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Crystal Structure of Matriptase in complex with Inhibitor==
==Crystal Structure of Matriptase in complex with Inhibitor==
<StructureSection load='4jz1' size='340' side='right' caption='[[4jz1]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='4jz1' size='340' side='right'caption='[[4jz1]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4jz1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JZ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JZ1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4jz1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JZ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4JZ1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=F4D:4,4-[(3-{[(4-FLUOROPHENYL)SULFONYL]AMINO}PYRIDINE-2,6-DIYL)BIS(OXY)]DIBENZENECARBOXIMIDAMIDE'>F4D</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jyt|4jyt]], [[4jzi|4jzi]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F4D:4,4-[(3-{[(4-FLUOROPHENYL)SULFONYL]AMINO}PYRIDINE-2,6-DIYL)BIS(OXY)]DIBENZENECARBOXIMIDAMIDE'>F4D</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ST14, PRSS14, SNC19, TADG15 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4jz1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jz1 OCA], [https://pdbe.org/4jz1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4jz1 RCSB], [https://www.ebi.ac.uk/pdbsum/4jz1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jz1 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Matriptase Matriptase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.109 3.4.21.109] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jz1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jz1 OCA], [http://pdbe.org/4jz1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jz1 RCSB], [http://www.ebi.ac.uk/pdbsum/4jz1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jz1 ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
[[http://www.uniprot.org/uniprot/ST14_HUMAN ST14_HUMAN]] Defects in ST14 are a cause of ichthyosis autosomal recessive with hypotrichosis (ARIH) [MIM:[http://omim.org/entry/610765 610765]]. ARIH is a skin disorder characterized by congenital ichthyosis associated with the presence of less than the normal amount of hair.<ref>PMID:17273967</ref>
[https://www.uniprot.org/uniprot/ST14_HUMAN ST14_HUMAN] Defects in ST14 are a cause of ichthyosis autosomal recessive with hypotrichosis (ARIH) [MIM:[https://omim.org/entry/610765 610765]. ARIH is a skin disorder characterized by congenital ichthyosis associated with the presence of less than the normal amount of hair.<ref>PMID:17273967</ref>  
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/ST14_HUMAN ST14_HUMAN]] Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.  
[https://www.uniprot.org/uniprot/ST14_HUMAN ST14_HUMAN] Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 23:


==See Also==
==See Also==
*[[Matriptase|Matriptase]]
*[[Matriptase 3D structures|Matriptase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Matriptase]]
[[Category: Large Structures]]
[[Category: Ashok, K N]]
[[Category: Ashok KN]]
[[Category: Chakshusmathi, G]]
[[Category: Chakshusmathi G]]
[[Category: Ramesh, K S]]
[[Category: Ramesh KS]]
[[Category: Ravi, B C]]
[[Category: Ravi BC]]
[[Category: Subramanya, H S]]
[[Category: Subramanya HS]]
[[Category: Hydrolase-hydrolase inhibitor complex]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA