3w08: Difference between revisions
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==Crystal structure of aldoxime dehydratase== | ==Crystal structure of aldoxime dehydratase== | ||
<StructureSection load='3w08' size='340' side='right' caption='[[3w08]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='3w08' size='340' side='right'caption='[[3w08]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3w08]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3w08]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_chlororaphis Pseudomonas chlororaphis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W08 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W08 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w08 OCA], [https://pdbe.org/3w08 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w08 RCSB], [https://www.ebi.ac.uk/pdbsum/3w08 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w08 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/OXD_PSECL OXD_PSECL] Catalyzes the dehydration of aldoximes to their corresponding nitrile (PubMed:12773527, PubMed:23382199). Aliphatic aldoximes are more effective substrates than aromatic aldoximes (PubMed:12773527). Shows high activity with butyraldoxime and acetaldoxime, but only weak activity with the aromatic aldoxime pyridine-2-aldoxime (PubMed:12773527). Cannot use benzaldoxime, isonitrosoacetophenone and pyridine-4-aldoxime (PubMed:12773527). Is involved in the metabolism of aldoxime in vivo (PubMed:12773527).<ref>PMID:12773527</ref> <ref>PMID:23382199</ref> | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Hara | [[Category: Pseudomonas chlororaphis]] | ||
[[Category: Hashimoto | [[Category: Hara K]] | ||
[[Category: Hashimoto | [[Category: Hashimoto H]] | ||
[[Category: Hishiki | [[Category: Hashimoto Y]] | ||
[[Category: Kobayashi | [[Category: Hishiki A]] | ||
[[Category: Nomura | [[Category: Kobayashi M]] | ||
[[Category: Oinuma | [[Category: Nomura J]] | ||
[[Category: Wada | [[Category: Oinuma KI]] | ||
[[Category: Wada K]] | |||