3s5o: Difference between revisions

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 ==Crystal Structure of Human 4-hydroxy-2-oxoglutarate Aldolase Bound to Pyruvate==
-<StructureSection load='3s5o' size='340' side='right' caption='[[3s5o]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
+<StructureSection load='3s5o' size='340' side='right'caption='[[3s5o]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3s5o]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S5O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3S5O FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3s5o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S5O FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
 <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KPI:(2S)-2-AMINO-6-[(1-HYDROXY-1-OXO-PROPAN-2-YLIDENE)AMINO]HEXANOIC+ACID'>KPI</scene></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3s5n|3s5n]]</td></tr>
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3s5n|3s5n]]</div></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C10orf65, DHDPSL, HOGA1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C10orf65, DHDPSL, HOGA1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-2-oxoglutarate_aldolase 4-hydroxy-2-oxoglutarate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.3.16 4.1.3.16] </span></td></tr>
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/4-hydroxy-2-oxoglutarate_aldolase 4-hydroxy-2-oxoglutarate aldolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.3.16 4.1.3.16] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3s5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s5o OCA], [http://pdbe.org/3s5o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3s5o RCSB], [http://www.ebi.ac.uk/pdbsum/3s5o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3s5o ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s5o OCA], [https://pdbe.org/3s5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s5o RCSB], [https://www.ebi.ac.uk/pdbsum/3s5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s5o ProSAT]</span></td></tr>
 </table>
 == Disease ==
-[[http://www.uniprot.org/uniprot/HOGA1_HUMAN HOGA1_HUMAN]] Primary hyperoxaluria type 3. The disease is caused by mutations affecting the gene represented in this entry.
+[[https://www.uniprot.org/uniprot/HOGA1_HUMAN HOGA1_HUMAN]] Primary hyperoxaluria type 3. The disease is caused by mutations affecting the gene represented in this entry.
 == Function ==
-[[http://www.uniprot.org/uniprot/HOGA1_HUMAN HOGA1_HUMAN]] Catalyzes the final step in the metabolic pathway of hydroxyproline.<ref>PMID:20797690</ref> <ref>PMID:21998747</ref>
+[[https://www.uniprot.org/uniprot/HOGA1_HUMAN HOGA1_HUMAN]] Catalyzes the final step in the metabolic pathway of hydroxyproline.<ref>PMID:20797690</ref> <ref>PMID:21998747</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 26: / Line 26: @@
 ==See Also==
-*[[Aldolase|Aldolase]]
+*[[Aldolase 3D structures|Aldolase 3D structures]]
 == References ==
 <references/>
@@ Line 33: / Line 33: @@
 [[Category: 4-hydroxy-2-oxoglutarate aldolase]]
 [[Category: Human]]
+[[Category: Large Structures]]
 [[Category: Lowther, W T]]
 [[Category: Riedel, T J]]