4epd: Difference between revisions

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 ==Initial Urease Structure for Radiation Damage Experiment at 300 K==
-<StructureSection load='4epd' size='340' side='right' caption='[[4epd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+<StructureSection load='4epd' size='340' side='right'caption='[[4epd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4epd]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"aerobacter_aerogenes"_hormaeche_and_edwards_1958 "aerobacter aerogenes" hormaeche and edwards 1958]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EPD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EPD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4epd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_aerogenes Klebsiella aerogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EPD FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4epd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4epd OCA], [https://pdbe.org/4epd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4epd RCSB], [https://www.ebi.ac.uk/pdbsum/4epd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4epd ProSAT]</span></td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ep8|4ep8]], [[4epb|4epb]], [[4epe|4epe]]</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ureC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=548 "Aerobacter aerogenes" Hormaeche and Edwards 1958]), ureB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=548 "Aerobacter aerogenes" Hormaeche and Edwards 1958]), ureA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=548 "Aerobacter aerogenes" Hormaeche and Edwards 1958])</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Urease Urease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.5 3.5.1.5] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4epd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4epd OCA], [http://pdbe.org/4epd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4epd RCSB], [http://www.ebi.ac.uk/pdbsum/4epd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4epd ProSAT]</span></td></tr>
 </table>
+== Function ==
+[[https://www.uniprot.org/uniprot/URE1_KLEAE URE1_KLEAE]]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 22: / Line 20: @@
 ==See Also==
-*[[Urease|Urease]]
+*[[Urease 3D structures|Urease 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Aerobacter aerogenes hormaeche and edwards 1958]]
+[[Category: Klebsiella aerogenes]]
-[[Category: Urease]]
+[[Category: Large Structures]]
-[[Category: Badeau, R]]
+[[Category: Badeau R]]
-[[Category: Hopkins, J B]]
+[[Category: Hopkins JB]]
-[[Category: Thorne, R E]]
+[[Category: Thorne RE]]
-[[Category: Warkentin, M]]
+[[Category: Warkentin M]]
-[[Category: Alpha-beta barrel]]
-[[Category: Hydrolase]]
-[[Category: Nickel metalloenzyme]]
-[[Category: Radiation damage]]