3be4: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360==
==Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360==
<StructureSection load='3be4' size='340' side='right' caption='[[3be4]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='3be4' size='340' side='right'caption='[[3be4]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3be4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Crypi Crypi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BE4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BE4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3be4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa_II Cryptosporidium parvum Iowa II]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BE4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BE4 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cdg5_3360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=353152 CRYPI])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3be4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3be4 OCA], [http://pdbe.org/3be4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3be4 RCSB], [http://www.ebi.ac.uk/pdbsum/3be4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3be4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3be4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3be4 OCA], [https://pdbe.org/3be4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3be4 RCSB], [https://www.ebi.ac.uk/pdbsum/3be4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3be4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5CRC5_CRYPI Q5CRC5_CRYPI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/3be4_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/3be4_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 22:


==See Also==
==See Also==
*[[Adenylate kinase|Adenylate kinase]]
*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Crypi]]
[[Category: Cryptosporidium parvum Iowa II]]
[[Category: Amani, M]]
[[Category: Large Structures]]
[[Category: Arrowsmith, C H]]
[[Category: Amani M]]
[[Category: Artz, J D]]
[[Category: Arrowsmith CH]]
[[Category: Bochkarev, A]]
[[Category: Artz JD]]
[[Category: Edwards, A M]]
[[Category: Bochkarev A]]
[[Category: Hui, R]]
[[Category: Edwards AM]]
[[Category: Khuu, C]]
[[Category: Hui R]]
[[Category: Kozieradzki, I]]
[[Category: Khuu C]]
[[Category: Lew, J]]
[[Category: Kozieradzki I]]
[[Category: Lin, Y H]]
[[Category: Lew J]]
[[Category: Structural genomic]]
[[Category: Lin YH]]
[[Category: Schapira, M]]
[[Category: Schapira M]]
[[Category: Sun, X]]
[[Category: Sun X]]
[[Category: Weigelt, J]]
[[Category: Weigelt J]]
[[Category: Wernimont, A K]]
[[Category: Wernimont AK]]
[[Category: Zhao, Y]]
[[Category: Zhao Y]]
[[Category: Adenylate kinase]]
[[Category: Cryptosporidium parvum nonprotein kinase inhibitor]]
[[Category: Malaria]]
[[Category: Nucleotide-binding]]
[[Category: Sgc]]
[[Category: Transferase]]

Latest revision as of 15:07, 30 August 2023

Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360

Structural highlights

3be4 is a 1 chain structure with sequence from Cryptosporidium parvum Iowa II. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q5CRC5_CRYPI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3be4, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA