1nmi: Difference between revisions

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[[Image:1nmi.jpg|left|200px]]


{{Structure
==Solution structure of the imidazole complex of iso-1 cytochrome c==
|PDB= 1nmi |SIZE=350|CAPTION= <scene name='initialview01'>1nmi</scene>
<StructureSection load='1nmi' size='340' side='right'caption='[[1nmi]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>
<table><tr><td colspan='2'>[[1nmi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NMI FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 1 model</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nmi OCA], [https://pdbe.org/1nmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nmi RCSB], [https://www.ebi.ac.uk/pdbsum/1nmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nmi ProSAT]</span></td></tr>
|RELATEDENTRY=[[1yic|1YIC]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1nmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nmi OCA], [http://www.ebi.ac.uk/pdbsum/1nmi PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1nmi RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nm/1nmi_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nmi ConSurf].
<div style="clear:both"></div>


'''Solution structure of the imidazole complex of iso-1 cytochrome c'''
==See Also==
 
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
1NMI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NMI OCA].
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Single protein]]
[[Category: Liu G]]
[[Category: Liu, G.]]
[[Category: Tang W]]
[[Category: Tang, W.]]
[[Category: Tong Y]]
[[Category: Tong, Y.]]
[[Category: Wang J]]
[[Category: Wang, J.]]
[[Category: Yao Y]]
[[Category: Yao, Y.]]
[[Category: Zheng J]]
[[Category: Zheng, J.]]
[[Category: ligand-protein complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:32:30 2008''

Latest revision as of 03:18, 21 November 2024

Solution structure of the imidazole complex of iso-1 cytochrome cSolution structure of the imidazole complex of iso-1 cytochrome c

Structural highlights

1nmi is a 1 chain structure with sequence from Saccharomyces cerevisiae. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR, 1 model
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CYC1_YEAST Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

Drag the structure with the mouse to rotate

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