3vgm: Difference between revisions

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 ==Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose==
-<StructureSection load='3vgm' size='340' side='right' caption='[[3vgm]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
+<StructureSection load='3vgm' size='340' side='right'caption='[[3vgm]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3vgm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strgg Strgg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VGM FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3vgm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_griseus_subsp._griseus_NBRC_13350 Streptomyces griseus subsp. griseus NBRC 13350]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VGM FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vgk|3vgk]], [[3vgl|3vgl]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glkA, SGR_5377 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=455632 STRGG])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vgm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgm OCA], [https://pdbe.org/3vgm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vgm RCSB], [https://www.ebi.ac.uk/pdbsum/3vgm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgm ProSAT]</span></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vgm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vgm OCA], [http://pdbe.org/3vgm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vgm RCSB], [http://www.ebi.ac.uk/pdbsum/3vgm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vgm ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/B1VZT1_STRGG B1VZT1_STRGG]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
-*[[Hexokinase|Hexokinase]]
+*[[Hexokinase 3D structures|Hexokinase 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Glucokinase]]
+[[Category: Large Structures]]
-[[Category: Strgg]]
+[[Category: Streptomyces griseus subsp. griseus NBRC 13350]]
-[[Category: Horinouchi, S]]
+[[Category: Horinouchi S]]
-[[Category: Miyazono, K]]
+[[Category: Miyazono K]]
-[[Category: Morita, S]]
+[[Category: Morita S]]
-[[Category: Ohnishi, Y]]
+[[Category: Ohnishi Y]]
-[[Category: Tabei, N]]
+[[Category: Tabei N]]
-[[Category: Tanokura, M]]
+[[Category: Tanokura M]]
-[[Category: Rok family]]
-[[Category: Transferase]]