4knf: Difference between revisions

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 ==Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75==
-<StructureSection load='4knf' size='340' side='right' caption='[[4knf]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+<StructureSection load='4knf' size='340' side='right'caption='[[4knf]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4knf]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Gamma_proteobacterium_'hot_75m4' Gamma proteobacterium 'hot 75m4']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KNF FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4knf]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Gamma_proteobacterium_'Hot_75m4' Gamma proteobacterium 'Hot 75m4']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KNF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KNF FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4kly|4kly]], [[4jq6|4jq6]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4knf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4knf OCA], [http://pdbe.org/4knf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4knf RCSB], [http://www.ebi.ac.uk/pdbsum/4knf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4knf ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4knf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4knf OCA], [https://pdbe.org/4knf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4knf RCSB], [https://www.ebi.ac.uk/pdbsum/4knf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4knf ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PRRB_PRB02 PRRB_PRB02]] Light-driven proton pump. May have a regulatory rather than energy harvesting function, based on light-induced opening of proton channels, to modulate cell physiology depending on light intensity variations. Could be, therefore, a sensory rhodopsin, potentially associated with a transducer component.
+[https://www.uniprot.org/uniprot/PRRB_PRB02 PRRB_PRB02] Light-driven proton pump. May have a regulatory rather than energy harvesting function, based on light-induced opening of proton channels, to modulate cell physiology depending on light intensity variations. Could be, therefore, a sensory rhodopsin, potentially associated with a transducer component.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 21: @@
 ==See Also==
-*[[Rhodopsin|Rhodopsin]]
+*[[Bacteriorhodopsin 3D structures|Bacteriorhodopsin 3D structures]]
+*[[Rhodopsin 3D structures|Rhodopsin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Gamma proteobacterium 'hot 75m4']]
+[[Category: Gamma proteobacterium 'Hot 75m4']]
-[[Category: Gao, Y]]
+[[Category: Large Structures]]
-[[Category: Luecke, H]]
+[[Category: Gao Y]]
-[[Category: Ozorowski, G]]
+[[Category: Luecke H]]
-[[Category: Ran, T]]
+[[Category: Ozorowski G]]
-[[Category: Wang, W]]
+[[Category: Ran T]]
-[[Category: Ion transport]]
+[[Category: Wang W]]
-[[Category: Membrane]]
-[[Category: Proton pump]]
-[[Category: Proton transport]]
-[[Category: Retinylidene schiff base]]