3v2b: Difference between revisions

No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Human poly(adp-ribose) polymerase 15 (ARTD7, BAL3), macro domain 2 in complex with adenosine-5-diphosphoribose==
==Human poly(adp-ribose) polymerase 15 (ARTD7, BAL3), macro domain 2 in complex with adenosine-5-diphosphoribose==
<StructureSection load='3v2b' size='340' side='right' caption='[[3v2b]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='3v2b' size='340' side='right'caption='[[3v2b]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3v2b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3kh6 3kh6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V2B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V2B FirstGlance]. <br>
<table><tr><td colspan='2'>[[3v2b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3kh6 3kh6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V2B FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AR6:[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL+[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL]+HYDROGEN+PHOSPHATE'>AR6</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAL3, PARP15 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AR6:[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL+[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL]+HYDROGEN+PHOSPHATE'>AR6</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_ADP-ribosyltransferase NAD(+) ADP-ribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.30 2.4.2.30] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v2b OCA], [https://pdbe.org/3v2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v2b RCSB], [https://www.ebi.ac.uk/pdbsum/3v2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v2b ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v2b OCA], [http://pdbe.org/3v2b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3v2b RCSB], [http://www.ebi.ac.uk/pdbsum/3v2b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3v2b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/PAR15_HUMAN PAR15_HUMAN]] Transcriptional repressor. Has ADP-ribosyltransferase activity.  
[https://www.uniprot.org/uniprot/PAR15_HUMAN PAR15_HUMAN] Transcriptional repressor. Has ADP-ribosyltransferase activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:


==See Also==
==See Also==
*[[Poly (ADP-ribose) polymerase|Poly (ADP-ribose) polymerase]]
*[[Poly(ADP-ribose) polymerase 3D structures|Poly(ADP-ribose) polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C H]]
[[Category: Large Structures]]
[[Category: Berglund, H]]
[[Category: Arrowsmith CH]]
[[Category: Bountra, C]]
[[Category: Berglund H]]
[[Category: Collins, R]]
[[Category: Bountra C]]
[[Category: Edwards, A M]]
[[Category: Collins R]]
[[Category: Flodin, S]]
[[Category: Edwards AM]]
[[Category: Flores, A]]
[[Category: Flodin S]]
[[Category: Graslund, S]]
[[Category: Flores A]]
[[Category: Hammarstrom, M]]
[[Category: Graslund S]]
[[Category: Johansson, I]]
[[Category: Hammarstrom M]]
[[Category: Kallas, A]]
[[Category: Johansson I]]
[[Category: Karlberg, T]]
[[Category: Kallas A]]
[[Category: Kotenyova, T]]
[[Category: Karlberg T]]
[[Category: Kotzcsh, A]]
[[Category: Kotenyova T]]
[[Category: Kraulis, P]]
[[Category: Kotzcsh A]]
[[Category: Moche, M]]
[[Category: Kraulis P]]
[[Category: Nielsen, T K]]
[[Category: Moche M]]
[[Category: Nordlund, P]]
[[Category: Nielsen TK]]
[[Category: Nyman, T]]
[[Category: Nordlund P]]
[[Category: Persson, C]]
[[Category: Nyman T]]
[[Category: Roos, A K]]
[[Category: Persson C]]
[[Category: Structural genomic]]
[[Category: Roos AK]]
[[Category: Schuler, H]]
[[Category: Schuler H]]
[[Category: Schutz, P]]
[[Category: Schutz P]]
[[Category: Siponen, M I]]
[[Category: Siponen MI]]
[[Category: Thorsell, A G]]
[[Category: Thorsell AG]]
[[Category: Tresaugues, L]]
[[Category: Tresaugues L]]
[[Category: Weigelt, J]]
[[Category: Van den berg S]]
[[Category: Welin, M]]
[[Category: Weigelt J]]
[[Category: Wisniewska, M]]
[[Category: Welin M]]
[[Category: Berg, S Van den]]
[[Category: Wisniewska M]]
[[Category: Adp-ribose]]
[[Category: Adp-ribosylation]]
[[Category: B-aggressive lymphoma protein 3]]
[[Category: Bal3]]
[[Category: Glycosyltransferase]]
[[Category: Nucleus]]
[[Category: Sgc]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transferase]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA