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==Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallography== | ==Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallography== | ||
<StructureSection load='4ac5' size='340' side='right' caption='[[4ac5]], [[Resolution|resolution]] 8.20Å' scene=''> | <StructureSection load='4ac5' size='340' side='right'caption='[[4ac5]], [[Resolution|resolution]] 8.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4ac5]] is a 4 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4ac5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Blastochloris_viridis Blastochloris viridis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AC5 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 8.2Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BPB:BACTERIOPHEOPHYTIN+B'>BPB</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MQ7:MENAQUINONE-7'>MQ7</scene>, <scene name='pdbligand=NS5:15-CIS-1,2-DIHYDRONEUROSPORENE'>NS5</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ac5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ac5 OCA], [https://pdbe.org/4ac5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ac5 RCSB], [https://www.ebi.ac.uk/pdbsum/4ac5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ac5 ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/RCEM_BLAVI RCEM_BLAVI] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 25: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Blastochloris viridis]] | [[Category: Blastochloris viridis]] | ||
[[Category: Andreasson | [[Category: Large Structures]] | ||
[[Category: Aquila | [[Category: Andreasson J]] | ||
[[Category: Arnlund | [[Category: Aquila A]] | ||
[[Category: Bajt | [[Category: Arnlund D]] | ||
[[Category: Barthelmess | [[Category: Bajt S]] | ||
[[Category: Barty | [[Category: Barthelmess M]] | ||
[[Category: Bogan | [[Category: Barty A]] | ||
[[Category: Bostedt | [[Category: Bogan MJ]] | ||
[[Category: Bozek | [[Category: Bostedt C]] | ||
[[Category: Caleman | [[Category: Bozek JD]] | ||
[[Category: Chapman | [[Category: Caleman C]] | ||
[[Category: Coffee | [[Category: Chapman HN]] | ||
[[Category: Coppola | [[Category: Coffee R]] | ||
[[Category: Davidsson | [[Category: Coppola N]] | ||
[[Category: | [[Category: Davidsson J]] | ||
[[Category: Doak | [[Category: DePonte DP]] | ||
[[Category: Ekeberg | [[Category: Doak RB]] | ||
[[Category: Epp | [[Category: Ekeberg T]] | ||
[[Category: Erk | [[Category: Epp SW]] | ||
[[Category: Fleckenstein | [[Category: Erk B]] | ||
[[Category: Foucar | [[Category: Fleckenstein H]] | ||
[[Category: Fromme | [[Category: Foucar L]] | ||
[[Category: Graafsma | [[Category: Fromme P]] | ||
[[Category: Gumprecht | [[Category: Graafsma H]] | ||
[[Category: Hajdu | [[Category: Gumprecht L]] | ||
[[Category: Hampton | [[Category: Hajdu J]] | ||
[[Category: Hartmann | [[Category: Hampton CY]] | ||
[[Category: Hartmann | [[Category: Hartmann A]] | ||
[[Category: Hauser | [[Category: Hartmann R]] | ||
[[Category: Hirsemann | [[Category: Hauser G]] | ||
[[Category: Holl | [[Category: Hirsemann H]] | ||
[[Category: Hunter | [[Category: Holl P]] | ||
[[Category: Johansson | [[Category: Hunter MS]] | ||
[[Category: Kassemeyer | [[Category: Johansson LC]] | ||
[[Category: Katona | [[Category: Kassemeyer S]] | ||
[[Category: Kimmel | [[Category: Katona G]] | ||
[[Category: Kirian | [[Category: Kimmel N]] | ||
[[Category: Liang | [[Category: Kirian RA]] | ||
[[Category: Lomb | [[Category: Liang M]] | ||
[[Category: Maia | [[Category: Lomb L]] | ||
[[Category: Malmerberg | [[Category: Maia FRNC]] | ||
[[Category: Marchesini | [[Category: Malmerberg E]] | ||
[[Category: Martin | [[Category: Marchesini S]] | ||
[[Category: Nass | [[Category: Martin AV]] | ||
[[Category: Neutze | [[Category: Nass K]] | ||
[[Category: Reich | [[Category: Neutze R]] | ||
[[Category: Rolles | [[Category: Reich C]] | ||
[[Category: Rudek | [[Category: Rolles D]] | ||
[[Category: Rudenko | [[Category: Rudek B]] | ||
[[Category: Schlichting | [[Category: Rudenko A]] | ||
[[Category: Schulz | [[Category: Schlichting I]] | ||
[[Category: Seibert | [[Category: Schulz J]] | ||
[[Category: Shoeman | [[Category: Seibert MM]] | ||
[[Category: Sierra | [[Category: Shoeman RL]] | ||
[[Category: Soltau | [[Category: Sierra R]] | ||
[[Category: Spence | [[Category: Soltau H]] | ||
[[Category: Starodub | [[Category: Spence JCH]] | ||
[[Category: Stellato | [[Category: Starodub D]] | ||
[[Category: Stern | [[Category: Stellato F]] | ||
[[Category: Struder | [[Category: Stern S]] | ||
[[Category: Timneanu | [[Category: Struder L]] | ||
[[Category: Ullrich | [[Category: Timneanu N]] | ||
[[Category: Wahlgren | [[Category: Ullrich J]] | ||
[[Category: Wang | [[Category: Wahlgren WY]] | ||
[[Category: Weidenspointner | [[Category: Wang X]] | ||
[[Category: Weierstall | [[Category: Weidenspointner G]] | ||
[[Category: White | [[Category: Weierstall U]] | ||
[[Category: Wunderer | [[Category: White TA]] | ||
[[Category: Wunderer C]] | |||
Latest revision as of 13:38, 6 November 2024
Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallographyLipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallography
Structural highlights
FunctionRCEM_BLAVI The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. Publication Abstract from PubMedX-ray free electron laser (X-FEL)-based serial femtosecond crystallography is an emerging method with potential to rapidly advance the challenging field of membrane protein structural biology. Here we recorded interpretable diffraction data from micrometer-sized lipidic sponge phase crystals of the Blastochloris viridis photosynthetic reaction center delivered into an X-FEL beam using a sponge phase micro-jet. Lipidic phase membrane protein serial femtosecond crystallography.,Johansson LC, Arnlund D, White TA, Katona G, Deponte DP, Weierstall U, Doak RB, Shoeman RL, Lomb L, Malmerberg E, Davidsson J, Nass K, Liang M, Andreasson J, Aquila A, Bajt S, Barthelmess M, Barty A, Bogan MJ, Bostedt C, Bozek JD, Caleman C, Coffee R, Coppola N, Ekeberg T, Epp SW, Erk B, Fleckenstein H, Foucar L, Graafsma H, Gumprecht L, Hajdu J, Hampton CY, Hartmann R, Hartmann A, Hauser G, Hirsemann H, Holl P, Hunter MS, Kassemeyer S, Kimmel N, Kirian RA, Maia FR, Marchesini S, Martin AV, Reich C, Rolles D, Rudek B, Rudenko A, Schlichting I, Schulz J, Seibert MM, Sierra RG, Soltau H, Starodub D, Stellato F, Stern S, Struder L, Timneanu N, Ullrich J, Wahlgren WY, Wang X, Weidenspointner G, Wunderer C, Fromme P, Chapman HN, Spence JC, Neutze R Nat Methods. 2012 Jan 29. doi: 10.1038/nmeth.1867. PMID:22286383[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)
OCACategories:
- Blastochloris viridis
- Large Structures
- Andreasson J
- Aquila A
- Arnlund D
- Bajt S
- Barthelmess M
- Barty A
- Bogan MJ
- Bostedt C
- Bozek JD
- Caleman C
- Chapman HN
- Coffee R
- Coppola N
- Davidsson J
- DePonte DP
- Doak RB
- Ekeberg T
- Epp SW
- Erk B
- Fleckenstein H
- Foucar L
- Fromme P
- Graafsma H
- Gumprecht L
- Hajdu J
- Hampton CY
- Hartmann A
- Hartmann R
- Hauser G
- Hirsemann H
- Holl P
- Hunter MS
- Johansson LC
- Kassemeyer S
- Katona G
- Kimmel N
- Kirian RA
- Liang M
- Lomb L
- Maia FRNC
- Malmerberg E
- Marchesini S
- Martin AV
- Nass K
- Neutze R
- Reich C
- Rolles D
- Rudek B
- Rudenko A
- Schlichting I
- Schulz J
- Seibert MM
- Shoeman RL
- Sierra R
- Soltau H
- Spence JCH
- Starodub D
- Stellato F
- Stern S
- Struder L
- Timneanu N
- Ullrich J
- Wahlgren WY
- Wang X
- Weidenspointner G
- Weierstall U
- White TA
- Wunderer C