5fyn: Difference between revisions

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'''Unreleased structure'''


The entry 5fyn is ON HOLD  until Paper Publication
==Sub-tomogram averaging of Tula virus glycoprotein spike==
<SX load='5fyn' size='340' side='right' viewer='molstar' caption='[[5fyn]], [[Resolution|resolution]] 15.60&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5fyn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Puumala_orthohantavirus Puumala orthohantavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FYN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FYN FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 15.6&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fyn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fyn OCA], [https://pdbe.org/5fyn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fyn RCSB], [https://www.ebi.ac.uk/pdbsum/5fyn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fyn ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9WJ31_9VIRU Q9WJ31_9VIRU]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Hantaviruses, a geographically diverse group of zoonotic pathogens, initiate cell infection through the concerted action of Gn and Gc viral surface glycoproteins. Here, we describe the high-resolution crystal structure of the antigenic ectodomain of Gn from Puumala hantavirus (PUUV), a causative agent of hemorrhagic fever with renal syndrome. Fitting of PUUV Gn into an electron cryomicroscopy reconstruction of intact Gn-Gc spike complexes from the closely related but non-pathogenic Tula hantavirus localized Gn tetramers to the membrane-distal surface of the virion. The accuracy of the fitting was corroborated by epitope mapping and genetic analysis of available PUUV sequences. Interestingly, Gn exhibits greater non-synonymous sequence diversity than the less accessible Gc, supporting a role of the host humoral immune response in exerting selective pressure on the virus surface. The fold of PUUV Gn is likely to be widely conserved across hantaviruses.


Authors: Li, S., Rissanen, I., Zeltina, A., Hepojoki, J., Raghwani, J., Harlos, K., Pybus, O.G., Huiskonen, J.T., Bowden, T.A.
A Molecular-Level Account of the Antigenic Hantaviral Surface.,Li S, Rissanen I, Zeltina A, Hepojoki J, Raghwani J, Harlos K, Pybus OG, Huiskonen JT, Bowden TA Cell Rep. 2016 May 3;15(5):959-67. doi: 10.1016/j.celrep.2016.03.082. Epub 2016, Apr 21. PMID:27117403<ref>PMID:27117403</ref>


Description: Sub-tomogram averaging of Tula virus glycoprotein spike
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Li, S]]
<div class="pdbe-citations 5fyn" style="background-color:#fffaf0;"></div>
[[Category: Raghwani, J]]
 
[[Category: Pybus, O.G]]
==See Also==
[[Category: Zeltina, A]]
*[[Sandbox 3001|Sandbox 3001]]
[[Category: Rissanen, I]]
*[[Spike protein|Spike protein]]
[[Category: Bowden, T.A]]
== References ==
[[Category: Huiskonen, J.T]]
<references/>
[[Category: Harlos, K]]
__TOC__
[[Category: Hepojoki, J]]
</SX>
[[Category: Large Structures]]
[[Category: Puumala orthohantavirus]]
[[Category: Bowden TA]]
[[Category: Harlos K]]
[[Category: Hepojoki J]]
[[Category: Huiskonen JT]]
[[Category: Li S]]
[[Category: Pybus OG]]
[[Category: Raghwani J]]
[[Category: Rissanen I]]
[[Category: Zeltina A]]

Latest revision as of 16:32, 26 July 2023

Sub-tomogram averaging of Tula virus glycoprotein spikeSub-tomogram averaging of Tula virus glycoprotein spike

5fyn, resolution 15.60Å

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