Sandbox 78: Difference between revisions

No edit summary
No edit summary
 
(39 intermediate revisions by 3 users not shown)
Line 1: Line 1:
==Human Gastric Lipase==
<Structure load='1HLG' size='350' frame='true' align='right' caption='Structure of Human Gastric Lipase (PDB input: 1HLG)' />
<Structure load='1HLG' size='350' frame='true' align='right' caption='Structure of Human Gastric Lipase (PDB input: 1HLG)' />
<Structure load='1HLG' size='350' frame='true' align='right' caption='Hydrophobic and Hydrophilic Regions of Human Gastric Lipase' scene='72/727839/Hydrophobic_and_polar_regions/1' />
<Structure load='1HLG' size='350' frame='true' align='right' caption='Secondary Structure of Human Gastric Lipase' scene='72/727839/Secondary_structure/1' />


== Introduction ==
== Introduction ==


Human gastric lipase (HGL, E.C. 3.1.1.3) (PBD ID: 1hlg) is a type of [[lipase]] (of the enzyme class [[hydrolase]]) that is responsible for initiating the digestion of dietary fats in the stomach <ref name="armand">PMID:7598069</ref>. This pH-stable enzyme is secreted by the fundic chief cells of the human stomach and catalyzes 10-20% of total lipolytic processes (i.e., those involving fat breakdown) in healthy adults <ref name="armand" />. HGL specifically catalyzes the hydrolysis of triacylglycerol in order to produce diacylglycerol and a carboxylate byproduct <ref name="roussel">PMID:10358049</ref>, a process that facilitates subsequent fat breakdown by pancreatic lipase <ref name="dogs">PMID:20965171</ref>. In terms of disease implications, there is evidence to suggest that HGL secretion is altered in individuals with gastritis <ref name="gastritis">PMID:23899880</ref>.
Human gastric lipase (HGL, E.C. 3.1.1.3) (PBD ID: 1hlg) is the [[lipase]] that is responsible for initiating the digestion of dietary fats in the stomach <ref name="armand">PMID:7598069</ref>. This acid-stable enzyme <ref name="gastritis">PMID:23899880</ref> is secreted by the fundic chief cells of the human stomach and catalyzes 10-20% of total lipolytic processes (i.e., those involving fat breakdown) in healthy adults <ref name="armand" />. HGL specifically catalyzes the hydrolysis of triacylglycerol in order to produce diacylglycerol and a carboxylate byproduct <ref name="roussel">PMID:10358049</ref>, a process that facilitates subsequent fat breakdown by pancreatic lipase <ref name="dogs">PMID:20965171</ref>. In terms of disease implications, there is evidence to suggest that HGL secretion is altered in individuals with gastritis (the most common gastric condition, in which the stomach lining is inflamed) <ref name="gastritis" />.


== Structural highlights ==
== Structural highlights ==


HGL, a 379 amino acid residue-long lipase enzyme, possesses a catalytic arm consisting of residues Ser-153, His-353, and Asp-324 essential to the breakdown of lipids, coordinated with an oxyanion hole Leu-67 Gln-154 <ref name="dogs">PMID:20965171</ref>, that serves to stabilize the transition state. Structurally, the human gastric lipase exhibits a complex, coordinated conformation, where the "lid", residues 215-244 <ref name="dogs">PMID:20965171</ref>, of the lipase gives way to the hydrophobic areas both surrounding the active site and interfacing the lid, thought to draw lipids and promote docking   <ref name="roussel" />.  
HGL, a dimeric [[hydrolase]] enzyme consisting of two 379 amino acid residue-long subunits, possesses a <scene name='72/728060/Catalytic_elbow/3'>Catalytic Arm</scene> that contains residues Ser-153, His-353, and Asp-324. This structure is essential to the breakdown of lipids, coordinated with an <scene name='72/728060/Arm_and_hole/1'>Oxyanion Hole</scene> at Leu-67 and Gln-154 <ref name="dogs">PMID:20965171</ref>, that serves to stabilize the transition state. Structurally, the human gastric lipase exhibits a complex <scene name='72/728060/Secondary_structure/1'>Secondary Structure</scene> (beta sheets shown in yellow, alpha helices shown in orange, coiled coils shown in green, and amino acid side chains shown as purple). The <scene name='72/728060/1hlg_lid/5'>"Lid"</scene> of HGL at residues 215-244 <ref name="dogs">PMID:20965171</ref> gives way to the <scene name='72/728060/Hydrophobic_regions/1'>Hydrophobic Areas</scene> (hydrophobic regions noted in red) both surrounding the active site and interfacing the lid. These areas are thought to draw lipids and promote docking <ref name="roussel" />.  


== Function ==
== Function ==


As an esterase with a catalytically active serine, HGL exhibits an established serine esterase mechanism. The active serine is facilitated first by the neighboring formation of a salt bridge between Asp-136 and His-152, which induces the appropriation a proton from Ser-153. The now highly nucleophilic Ser-153 would attack the carbonyl carbon of the acetate group in triacylglycerol. Following the attack, the species is tetrahedral, stabilized by the oxyanion hole; however, soon the species disassembles, into the covalently bonded acetate and lipase, and the serine undergoes deacylation where water acts at the hydroxyl group. This final step restores Ser-153 to its protonated state. '''*** CITE http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3554927/?report=printable'''
[[Image:Hydrolysis triacylglycerol reaction.png|400px|left|thumb| The hydrolysis of triacylglycerol that is catalyzed by HGL <ref>Adapted from [http://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/enzymes/GetPage.pl?ec_number=3.1.1.3]; image generated using [https://www.emolecules.com]</ref>.]]
 
HGL functions at an optimal pH of approximately five, and primarily catalyzes the hydrolysis of short-chain triacylglycerols <ref name="kinetic assay">PMID:3743968</ref>.
 
As an esterase with a catalytically active serine, HGL exhibits a mechanism resembling the established serine esterase mechanism. The active site serine, located within the <scene name='72/728060/Catalytic_elbow/3'>Catalytic Arm</scene>, is facilitated first by the neighboring formation of a salt bridge between Asp-136 and His-152, which induces the appropriation of a proton from Ser-153. The now highly nucleophilic Ser-153 will attack the carbonyl carbon of the acetate group in a triacylglycerol molecule. The tetrahedral species is stabilized by the oxyanion hole. However, as soon as the species disassembles into the covalently bonded acetate and lipase, the serine undergoes deacylation in which water acts as the nucleophile. This final step restores Ser-153 to its protonated state <ref name="esterase">PMID:23209280</ref>.  


== Relevance to Human Health & Disease ==
== Relevance to Human Health & Disease ==


A study was completed to discover the understanding of hormonal regulation of gastric lipase secretion in children and adolescents, as this is still very limited.
Tomasik et al. (2013) <ref name="gastritis" /> investigated the hormonal regulation of HGL secretion in children and adolescents with gastritis. HGL activity was compared across three groups: one experimental group consisting of adolescents diagnosed with ''Helicobacter pylori'' gastritis (''n'' = 10), another experimental group consisting of adolescents with a non-''H. pylori'' induced form of gastritis (''n'' = 10), and one control group of healthy adolescents (''n'' = 14). HGL activity, in addition to plasma concentrations of glucagon-like peptide-1, cholecystokinin, and glucose-dependent insulinotropic peptide, were observed through analysis of gastric juice samples that had been collected via endoscopic measurements from each patient.


The activity of human gastric lipase was compared among two experimental groups and one control group.  The control group included 14 healthy adolescents.  The experimental groups were one group of 10 patients diagnosed with ''Helicobacter pylori'' gastritis, and another group of patients exposed to other pathogens besides ''Helicobacter pylori'' to cause gastritis.  The activity of human gastric lipase was observed through endoscopic measurements within the collected gastric juice from each patient.  The plasma concentrations of glucagon-like peptide-1, cholecystokinin, and glucose-dependent insulinotropic peptide were determined in all patients as well. 
Patients whose superficial gastritis was induced by pathogens other than ''H. pylori'' exhibited lower levels of HGL activity compared to both healthy adolescents (''p'' < .005) and those who were diagnosed with ''H. pylori'' gastritis (''p'' < .005). Mean plasma concentrations of glucose-dependent insulinotropic peptide were lower in healthy patients (''p'' < 0.005) than in those with non-''H. pylori'' gastritis (''p'' < .003) and those with ''H. pylori'' gastritis (''p'' < 0.01).  Regulation of HGL secretion by glucagon-like peptide-1 and cholecystokinin was therefore found to be altered in adolescents with gastritis. In addition, glucose-dependent insulinotropic peptide was found to be a powerful activator of human gastric lipase activity in all experimental and control groups <ref name="gastritis" />.
 
This study suggested that the activity of human gastric lipase activity was changed in patients that were diagnosed with superficial gastritis induced by pathogens other than ''Helicobacter pylori''.  The level of activity of human gastric lipase was significantly lower in patients with superficial gastritis than in patients that were healthy (p<0.005) and were diagnosed with ''Helicobacter pylori'' gastritis (p<0.005). The mean levels of glucose-dependent insulinotropic peptide plasma concentrations were lower for patients in the control group (p<0.005) than in non-''Helicobacter pylori'' gastritis and ''Helicobacter pylori'' gastritis patients (p<0.01).  The regulation of human gastric lipase secretion by glucagon-like peptide-1 and cholecystokinin was found to be altered in those whom had gastritis. Glucose-dependent insulinotropic peptide in both healthy and gastritis-diagnosed patients was found to be a powerful controller of human gastric lipase activity <ref name="gastritis" />.


== References ==
== References ==


<references/>
<references/>

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Megan M. Roy, Aubrey A. Siebels, Giavanna Verdi