1j0f: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Solution Structure of the SH3 Domain Binding Glutamic Acid-rich Protein Like 3==
==Solution Structure of the SH3 Domain Binding Glutamic Acid-rich Protein Like 3==
<StructureSection load='1j0f' size='340' side='right' caption='[[1j0f]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='1j0f' size='340' side='right'caption='[[1j0f]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1j0f]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J0F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J0F FirstGlance]. <br>
<table><tr><td colspan='2'>[[1j0f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J0F FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 1110004L05 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j0f OCA], [http://pdbe.org/1j0f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j0f RCSB], [http://www.ebi.ac.uk/pdbsum/1j0f PDBsum], [http://www.topsan.org/Proteins/RSGI/1j0f TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j0f OCA], [https://pdbe.org/1j0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j0f RCSB], [https://www.ebi.ac.uk/pdbsum/1j0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j0f ProSAT], [https://www.topsan.org/Proteins/RSGI/1j0f TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/SH3L3_MOUSE SH3L3_MOUSE]] Could act as a modulator of glutaredoxin biological activity (By similarity).  
[https://www.uniprot.org/uniprot/SH3L3_MOUSE SH3L3_MOUSE] Could act as a modulator of glutaredoxin biological activity (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j0/1j0f_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j0/1j0f_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lk3 transgenic mice]]
[[Category: Large Structures]]
[[Category: Inoue, M]]
[[Category: Mus musculus]]
[[Category: Kigawa, T]]
[[Category: Inoue M]]
[[Category: Kobayashi, N]]
[[Category: Kigawa T]]
[[Category: Koshiba, S]]
[[Category: Kobayashi N]]
[[Category: Miyamoto, K]]
[[Category: Koshiba S]]
[[Category: Structural genomic]]
[[Category: Miyamoto K]]
[[Category: Tochio, N]]
[[Category: Tochio N]]
[[Category: Yokoyama, S]]
[[Category: Yokoyama S]]
[[Category: Rsgi]]
[[Category: Sh3bgr]]
[[Category: Thioredoxin fold]]
[[Category: Unknown function]]

Latest revision as of 02:40, 28 December 2023

Solution Structure of the SH3 Domain Binding Glutamic Acid-rich Protein Like 3Solution Structure of the SH3 Domain Binding Glutamic Acid-rich Protein Like 3

Structural highlights

1j0f is a 1 chain structure with sequence from Mus musculus. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

SH3L3_MOUSE Could act as a modulator of glutaredoxin biological activity (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA