2jz4: Difference between revisions

No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Putative 32 kDa myrosinase binding protein At3g16450.1 from Arabidopsis thaliana==
==Putative 32 kDa myrosinase binding protein At3g16450.1 from Arabidopsis thaliana==
<StructureSection load='2jz4' size='340' side='right' caption='[[2jz4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2jz4' size='340' side='right'caption='[[2jz4]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2jz4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JZ4 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2jz4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JZ4 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At3g16450.1, T02O04.5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jz4 OCA], [http://pdbe.org/2jz4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jz4 RCSB], [http://www.ebi.ac.uk/pdbsum/2jz4 PDBsum], [http://www.topsan.org/Proteins/CESG/2jz4 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jz4 OCA], [https://pdbe.org/2jz4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jz4 RCSB], [https://www.ebi.ac.uk/pdbsum/2jz4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jz4 ProSAT], [https://www.topsan.org/Proteins/CESG/2jz4 TOPSAN]</span></td></tr>
</table>
</table>
{{Large structure}}
== Function ==
[https://www.uniprot.org/uniprot/JAL33_ARATH JAL33_ARATH] Sugar-binding protein showing significant affinity for (Glc alpha(1-4)Glc)(3) maltohexaose, (Glc alpha(1-6)Glc)(3) isomaltohexaose, Gal alpha(1-4)Gal beta(1-4)Glc, GalNAc alpha(1-3)(Fuc alpha(1-2)) and Gal beta(1-3)(Fuc alpha(1-4))GlcNAc beta(1-3)Gal beta(1-4)Glc.<ref>PMID:19021763</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/2jz4_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/2jz4_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 30: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Arath]]
[[Category: Arabidopsis thaliana]]
[[Category: Aceti, D J]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Aceti DJ]]
[[Category: Guntert, P]]
[[Category: Guntert P]]
[[Category: Ikeya, T]]
[[Category: Ikeya T]]
[[Category: Kainosho, M]]
[[Category: Kainosho M]]
[[Category: Kato, K]]
[[Category: Kato K]]
[[Category: Markley, J L]]
[[Category: Markley JL]]
[[Category: Ono, A M]]
[[Category: Ono AM]]
[[Category: Sugimori, N]]
[[Category: Sugimori N]]
[[Category: Takeda, N]]
[[Category: Takeda N]]
[[Category: Terauchi, T]]
[[Category: Terauchi T]]
[[Category: Torizawa, T]]
[[Category: Torizawa T]]
[[Category: Yagi, H]]
[[Category: Yagi H]]
[[Category: Yamaguchi, Y]]
[[Category: Yamaguchi Y]]
[[Category: At3g16450 1]]
[[Category: Cesg]]
[[Category: Myrosinase binding protein]]
[[Category: PSI, Protein structure initiative]]
[[Category: Sail]]
[[Category: Stereo-array isotope labeling]]
[[Category: Unknown function]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA