2cgi: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2cgi.gif|left|200px]]<br />
-<applet load="2cgi" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="2cgi, resolution 1.35&Aring;" />
-'''SIRAS STRUCTURE OF TETRAGONAL LYSOSYME USING DERIVATIVE DATA COLLECTED AT THE HIGH ENERGY REMOTE HOLMIUM KEDGE'''<br />
-==About this Structure==
+==Siras structure of tetragonal lysozyme using derivative data collected at the high energy remote Holmium Kedge==
-CGI is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/ ] with CL as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2CGI OCA].
+<StructureSection load='2cgi' size='340' side='right'caption='[[2cgi]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
-[[Category: Lysozyme]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[2cgi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CGI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CGI FirstGlance]. <br>
-[[Category: Honkimaki, V.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-[[Category: Jakoncic, J.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-[[Category: Jouanneau, Y.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cgi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cgi OCA], [https://pdbe.org/2cgi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cgi RCSB], [https://www.ebi.ac.uk/pdbsum/2cgi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cgi ProSAT]</span></td></tr>
-[[Category: Michiel, M.Di.]]
+</table>
-[[Category: Stojanoff, V.]]
+== Evolutionary Conservation ==
-[[Category: Zhong, Z.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: CL]]
+Check<jmol>
-[[Category: absorption]]
+  <jmolCheckbox>
-[[Category: allergen]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cg/2cgi_consurf.spt"</scriptWhenChecked>
-[[Category: antimicrobial]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: bacteriolytic enzyme]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: glycosidase]]
+  </jmolCheckbox>
-[[Category: high energy]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cgi ConSurf].
-[[Category: holmium]]
+<div style="clear:both"></div>
-[[Category: hydrolase]]
-[[Category: mad]]
-[[Category: phasing]]
-[[Category: radiation damage]]
-[[Category: sad]]
-[[Category: siras]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov  5 15:23:07 2007''
+==See Also==
+*[[Lysozyme 3D structures|Lysozyme 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Gallus gallus]]
+[[Category: Large Structures]]
+[[Category: Di Michiel M]]
+[[Category: Honkimaki V]]
+[[Category: Jakoncic J]]
+[[Category: Jouanneau Y]]
+[[Category: Stojanoff V]]
+[[Category: Zhong Z]]