1otn: Difference between revisions

No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Calcium-binding mutant of the Internalin B LRR domain==
==Calcium-binding mutant of the Internalin B LRR domain==
<StructureSection load='1otn' size='340' side='right' caption='[[1otn]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
<StructureSection load='1otn' size='340' side='right'caption='[[1otn]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1otn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_monocytogenes_hominis"_nyfeldt_1932 "bacterium monocytogenes hominis" nyfeldt 1932]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OTN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OTN FirstGlance]. <br>
<table><tr><td colspan='2'>[[1otn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OTN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OTN FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1d0b|1d0b]], [[1otm|1otm]], [[1oto|1oto]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1otn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1otn OCA], [http://pdbe.org/1otn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1otn RCSB], [http://www.ebi.ac.uk/pdbsum/1otn PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1otn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1otn OCA], [https://pdbe.org/1otn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1otn RCSB], [https://www.ebi.ac.uk/pdbsum/1otn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1otn ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/INLB_LISMO INLB_LISMO]] Mediates the entry of Listeria monocytogenes into cells.  
[https://www.uniprot.org/uniprot/INLB_LISMO INLB_LISMO] Mediates the entry of Listeria monocytogenes into cells.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/1otn_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/1otn_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacterium monocytogenes hominis nyfeldt 1932]]
[[Category: Large Structures]]
[[Category: Chapman, T]]
[[Category: Listeria monocytogenes]]
[[Category: Copp, J]]
[[Category: Chapman T]]
[[Category: Cossart, P]]
[[Category: Copp J]]
[[Category: Dramsi, S]]
[[Category: Cossart P]]
[[Category: Geer, P van der]]
[[Category: Dramsi S]]
[[Category: Ghosh, P]]
[[Category: Ghosh P]]
[[Category: Marino, M]]
[[Category: Marino M]]
[[Category: Calcium-binding]]
[[Category: Van der Geer P]]
[[Category: Cell adhesion]]
[[Category: Inlb]]
[[Category: Internalin]]
[[Category: Invasion]]
[[Category: Listeria]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA