3brc: Difference between revisions

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==Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum==
==Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum==
<StructureSection load='3brc' size='340' side='right' caption='[[3brc]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='3brc' size='340' side='right'caption='[[3brc]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3brc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Metth Metth]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BRC FirstGlance]. <br>
<table><tr><td colspan='2'>[[3brc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BRC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MTH1144, GI:2622249 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=187420 METTH])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3brc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3brc OCA], [https://pdbe.org/3brc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3brc RCSB], [https://www.ebi.ac.uk/pdbsum/3brc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3brc ProSAT], [https://www.topsan.org/Proteins/MCSG/3brc TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3brc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3brc OCA], [http://pdbe.org/3brc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3brc RCSB], [http://www.ebi.ac.uk/pdbsum/3brc PDBsum], [http://www.topsan.org/Proteins/MCSG/3brc TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O27213_METTH O27213_METTH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/3brc_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/br/3brc_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Metth]]
[[Category: Large Structures]]
[[Category: Edwards, A M]]
[[Category: Methanothermobacter thermautotrophicus str. Delta H]]
[[Category: Evdokimova, E]]
[[Category: Edwards AM]]
[[Category: Joachimiak, A]]
[[Category: Evdokimova E]]
[[Category: Kudritska, M]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Kudritska M]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Zhang, R]]
[[Category: Zhang R]]
[[Category: Conserved protein]]
[[Category: Mcsg]]
[[Category: Methanobacterium thermoautotrophicum]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 04:38, 21 November 2024

Crystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicumCrystal structure of a conserved protein of unknown function from Methanobacterium thermoautotrophicum

Structural highlights

3brc is a 2 chain structure with sequence from Methanothermobacter thermautotrophicus str. Delta H. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O27213_METTH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3brc, resolution 1.60Å

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OCA