3cjp: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:3cjp.jpg|left|200px]]
- {{Structure
+==Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum==
-|PDB= 3cjp |SIZE=350|CAPTION= <scene name='initialview01'>3cjp</scene>, resolution 1.850&Aring;
+<StructureSection load='3cjp' size='340' side='right'caption='[[3cjp]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-|SITE= <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+A+302'>AC2</scene>, <scene name='pdbsite=AC3:Zn+Binding+Site+For+Residue+B+301'>AC3</scene> and <scene name='pdbsite=AC4:Zn+Binding+Site+For+Residue+B+302'>AC4</scene>
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+<table><tr><td colspan='2'>[[3cjp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_acetobutylicum_ATCC_824 Clostridium acetobutylicum ATCC 824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CJP FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-|GENE= CA_C3337 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272562 Clostridium acetobutylicum ATCC 824])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2159 COG2159]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjp OCA], [https://pdbe.org/3cjp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cjp RCSB], [https://www.ebi.ac.uk/pdbsum/3cjp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cjp ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cjp TOPSAN]</span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cjp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cjp OCA], [http://www.ebi.ac.uk/pdbsum/3cjp PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=3cjp RCSB]</span>
+</table>
-}}
+== Function ==
+[https://www.uniprot.org/uniprot/Q97DY3_CLOAB Q97DY3_CLOAB]
-'''Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum'''
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-==About this Structure==
+  <jmolCheckbox>
-CJP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_acetobutylicum_atcc_824 Clostridium acetobutylicum atcc 824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CJP OCA].
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/3cjp_consurf.spt"</scriptWhenChecked>
-[[Category: Clostridium acetobutylicum atcc 824]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Almo, S C.]]
+  </jmolCheckbox>
-[[Category: Bonanno, J B.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cjp ConSurf].
-[[Category: Burley, S K.]]
+<div style="clear:both"></div>
-[[Category: Malashkevich, V N.]]
+__TOC__
-[[Category: Meyer, A.]]
+</StructureSection>
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+[[Category: Clostridium acetobutylicum ATCC 824]]
-[[Category: Ramagopal, U A.]]
+[[Category: Large Structures]]
-[[Category: Sauder, J M.]]
+[[Category: Almo SC]]
-[[Category: Toro, R.]]
+[[Category: Bonanno JB]]
-[[Category: amidohydrolase]]
+[[Category: Burley SK]]
-[[Category: cac3332]]
+[[Category: Malashkevich VN]]
-[[Category: crystal structure]]
+[[Category: Meyer A]]
-[[Category: new york structural genomix research consortium]]
+[[Category: Ramagopal UA]]
-[[Category: nysgxrc]]
+[[Category: Sauder JM]]
-[[Category: protein structure initiative]]
+[[Category: Toro R]]
-[[Category: psi-2]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 10:00:28 2008''