2qm3: Difference between revisions

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[[Image:2qm3.jpg|left|200px]]


{{Structure
==Crystal structure of a predicted methyltransferase from Pyrococcus furiosus==
|PDB= 2qm3 |SIZE=350|CAPTION= <scene name='initialview01'>2qm3</scene>, resolution 2.05&Aring;
<StructureSection load='2qm3' size='340' side='right'caption='[[2qm3]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2qm3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QM3 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
|GENE= PF1111 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=186497 Pyrococcus furiosus DSM 3638])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2263 COG2263], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1568 COG1568]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qm3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm3 OCA], [https://pdbe.org/2qm3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qm3 RCSB], [https://www.ebi.ac.uk/pdbsum/2qm3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qm3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2qm3 TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qm3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm3 OCA], [http://www.ebi.ac.uk/pdbsum/2qm3 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2qm3 RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q8U1U4_PYRFU Q8U1U4_PYRFU]
'''Crystal structure of a predicted methyltransferase from Pyrococcus furiosus'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2QM3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM3 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qm3_consurf.spt"</scriptWhenChecked>
[[Category: Pyrococcus furiosus dsm 3638]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Clancy, S.]]
  </jmolCheckbox>
[[Category: Cuff, M E.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qm3 ConSurf].
[[Category: Duggan, E.]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</StructureSection>
[[Category: mcsg]]
[[Category: Large Structures]]
[[Category: midwest center for structural genomic]]
[[Category: Pyrococcus furiosus DSM 3638]]
[[Category: protein structure initiative]]
[[Category: Clancy S]]
[[Category: psi-2]]
[[Category: Cuff ME]]
[[Category: putative methyltransferase]]
[[Category: Duggan E]]
[[Category: pyrococcus furiosus]]
[[Category: Joachimiak A]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:43:21 2008''

Latest revision as of 10:46, 9 October 2024

Crystal structure of a predicted methyltransferase from Pyrococcus furiosusCrystal structure of a predicted methyltransferase from Pyrococcus furiosus

Structural highlights

2qm3 is a 1 chain structure with sequence from Pyrococcus furiosus DSM 3638. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8U1U4_PYRFU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2qm3, resolution 2.05Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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