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[[Image:2pdo.gif|left|200px]]


{{Structure
==Crystal Structure of the Putative Acetyltransferase of GNAT Family from Shigella flexneri==
|PDB= 2pdo |SIZE=350|CAPTION= <scene name='initialview01'>2pdo</scene>, resolution 2.00&Aring;
<StructureSection load='2pdo' size='340' side='right'caption='[[2pdo]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>[[2pdo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457t Shigella flexneri 2a str. 2457t]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PDO FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
|GENE= ypeA, SF2487, S_2635 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=42897 Shigella flexneri 2a])
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK03624 PRK03624]</span>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ypeA, SF2487, S_2635 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198215 Shigella flexneri 2a str. 2457T])</td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pdo OCA], [http://www.ebi.ac.uk/pdbsum/2pdo PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pdo RCSB]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pdo OCA], [https://pdbe.org/2pdo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pdo RCSB], [https://www.ebi.ac.uk/pdbsum/2pdo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pdo ProSAT], [https://www.topsan.org/Proteins/MCSG/2pdo TOPSAN]</span></td></tr>
}}
</table>
 
== Evolutionary Conservation ==
'''Crystal Structure of the Putative Acetyltransferase of GNAT Family from Shigella flexneri'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pdo_consurf.spt"</scriptWhenChecked>
2PDO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PDO OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Shigella flexneri 2a]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Holzle, D.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pdo ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: Kim, Y.]]
__TOC__
[[Category: Li, H.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: alpha-beta-alpha sandwich]]
[[Category: Shigella flexneri 2a str. 2457t]]
[[Category: mcsg]]
[[Category: Holzle, D]]
[[Category: midwest center for structural genomic]]
[[Category: Joachimiak, A]]
[[Category: protein structure initiative]]
[[Category: Kim, Y]]
[[Category: psi-2]]
[[Category: Li, H]]
[[Category: structural genomic]]
[[Category: Structural genomic]]
 
[[Category: Alpha-beta-alpha sandwich]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:39:21 2008''
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transferase]]

Latest revision as of 18:21, 17 June 2021

Crystal Structure of the Putative Acetyltransferase of GNAT Family from Shigella flexneriCrystal Structure of the Putative Acetyltransferase of GNAT Family from Shigella flexneri

Structural highlights

2pdo is a 8 chain structure with sequence from Shigella flexneri 2a str. 2457t. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
NonStd Res:
Gene:ypeA, SF2487, S_2635 (Shigella flexneri 2a str. 2457T)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pdo, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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