5doc: Difference between revisions

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New page: '''Unreleased structure''' The entry 5doc is ON HOLD Authors: Lye, M.F., El Omari, K., Filman, D.J., Hogle, J.M. Description: Category: Unreleased Structures [[Category: Hogle, J....
 
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'''Unreleased structure'''


The entry 5doc is ON HOLD
==Crystal structure of the Human Cytomegalovirus UL53 subunit of the NEC==
 
<StructureSection load='5doc' size='340' side='right'caption='[[5doc]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
Authors: Lye, M.F., El Omari, K., Filman, D.J., Hogle, J.M.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5doc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_herpesvirus_5_strain_AD169 Human herpesvirus 5 strain AD169]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DOC FirstGlance]. <br>
Description:  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: Hogle, J.M]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5doc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5doc OCA], [https://pdbe.org/5doc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5doc RCSB], [https://www.ebi.ac.uk/pdbsum/5doc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5doc ProSAT]</span></td></tr>
[[Category: Filman, D.J]]
</table>
[[Category: El Omari, K]]
== Function ==
[[Category: Lye, M.F]]
[https://www.uniprot.org/uniprot/NEC1_HCMVA NEC1_HCMVA] Plays an essential role in virion nuclear egress, the first step of virion release from infected cell. Within the host nucleus, NEC1 interacts with the newly formed capsid through the vertexes and directs it to the inner nuclear membrane by associating with NEC2. Induces the budding of the capsid at the inner nuclear membrane as well as its envelopment into the perinuclear space. There, the NEC1/NEC2 complex promotes the fusion of the enveloped capsid with the outer nuclear membrane and the subsequent release of the viral capsid into the cytoplasm where it will reach the secondary budding sites in the host Golgi or trans-Golgi network.[HAMAP-Rule:MF_04023]<ref>PMID:25339763</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Human herpesvirus 5 strain AD169]]
[[Category: Large Structures]]
[[Category: El Omari K]]
[[Category: Filman DJ]]
[[Category: Hogle JM]]
[[Category: Lye MF]]

Latest revision as of 15:25, 6 March 2024

Crystal structure of the Human Cytomegalovirus UL53 subunit of the NECCrystal structure of the Human Cytomegalovirus UL53 subunit of the NEC

Structural highlights

5doc is a 2 chain structure with sequence from Human herpesvirus 5 strain AD169. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.94Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NEC1_HCMVA Plays an essential role in virion nuclear egress, the first step of virion release from infected cell. Within the host nucleus, NEC1 interacts with the newly formed capsid through the vertexes and directs it to the inner nuclear membrane by associating with NEC2. Induces the budding of the capsid at the inner nuclear membrane as well as its envelopment into the perinuclear space. There, the NEC1/NEC2 complex promotes the fusion of the enveloped capsid with the outer nuclear membrane and the subsequent release of the viral capsid into the cytoplasm where it will reach the secondary budding sites in the host Golgi or trans-Golgi network.[HAMAP-Rule:MF_04023][1]

References

  1. Sharma M, Bender BJ, Kamil JP, Lye MF, Pesola JM, Reim NI, Hogle JM, Coen DM. Human cytomegalovirus UL97 phosphorylates the viral nuclear egress complex. J Virol. 2015 Jan;89(1):523-34. PMID:25339763 doi:10.1128/JVI.02426-14

5doc, resolution 1.94Å

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