2i71: Difference between revisions

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[[Image:2i71.gif|left|200px]]


{{Structure
==Crystal structure of a Conserved Protein of Unknown Function from Sulfolobus solfataricus P2==
|PDB= 2i71 |SIZE=350|CAPTION= <scene name='initialview01'>2i71</scene>, resolution 1.70&Aring;
<StructureSection load='2i71' size='340' side='right'caption='[[2i71]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2i71]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I71 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I71 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
|GENE= SSO1389 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1517 COG1517]</span>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SSO1389 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273057 SULSO])</td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i71 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i71 OCA], [http://www.ebi.ac.uk/pdbsum/2i71 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2i71 RCSB]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i71 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i71 OCA], [https://pdbe.org/2i71 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i71 RCSB], [https://www.ebi.ac.uk/pdbsum/2i71 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i71 ProSAT], [https://www.topsan.org/Proteins/MCSG/2i71 TOPSAN]</span></td></tr>
}}
</table>
 
== Function ==
'''Crystal structure of a Conserved Protein of Unknown Function from Sulfolobus solfataricus P2'''
[[https://www.uniprot.org/uniprot/CSX1_SULSO CSX1_SULSO]] CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (Potential).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2I71 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I71 OCA].  
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i7/2i71_consurf.spt"</scriptWhenChecked>
[[Category: Sulfolobus solfataricus]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Edwards, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i71 ConSurf].
[[Category: Onopriyenko, O.]]
<div style="clear:both"></div>
[[Category: Savchenko, A.]]
__TOC__
[[Category: Skarina, T.]]
</StructureSection>
[[Category: Tan, K.]]
[[Category: Large Structures]]
[[Category: apc6294]]
[[Category: Sulso]]
[[Category: conserved hypothetical protein]]
[[Category: Edwards, A]]
[[Category: mcsg]]
[[Category: Joachimiak, A]]
[[Category: midwest center for structural genomic]]
[[Category: Structural genomic]]
[[Category: protein structure initiative]]
[[Category: Onopriyenko, O]]
[[Category: psi-2]]
[[Category: Savchenko, A]]
[[Category: structural genomic]]
[[Category: Skarina, T]]
[[Category: sulfolobus solfataricus p2]]
[[Category: Tan, K]]
 
[[Category: Apc6294]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:31:07 2008''
[[Category: Conserved hypothetical protein]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Sulfolobus solfataricus p2]]
[[Category: Unknown function]]

Latest revision as of 10:29, 24 March 2021

Crystal structure of a Conserved Protein of Unknown Function from Sulfolobus solfataricus P2Crystal structure of a Conserved Protein of Unknown Function from Sulfolobus solfataricus P2

Structural highlights

2i71 is a 2 chain structure with sequence from Sulso. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:SSO1389 (SULSO)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[CSX1_SULSO] CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (Potential).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2i71, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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