2gf4: Difference between revisions

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[[Image:2gf4.gif|left|200px]]


{{Structure
==Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14==
|PDB= 2gf4 |SIZE=350|CAPTION= <scene name='initialview01'>2gf4</scene>, resolution 2.07&Aring;
<StructureSection load='2gf4' size='340' side='right'caption='[[2gf4]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2gf4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum_NRC-1 Halobacterium salinarum NRC-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GF4 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
|GENE= VNG1086C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2243 Halobacterium sp.])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1745 COG1745]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gf4 OCA], [https://pdbe.org/2gf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gf4 RCSB], [https://www.ebi.ac.uk/pdbsum/2gf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gf4 ProSAT], [https://www.topsan.org/Proteins/NESGC/2gf4 TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gf4 OCA], [http://www.ebi.ac.uk/pdbsum/2gf4 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2gf4 RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gf4_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
2GF4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halobacterium_sp. Halobacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GF4 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Halobacterium sp.]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gf4 ConSurf].
[[Category: Acton, T B.]]
<div style="clear:both"></div>
[[Category: Benach, J.]]
__TOC__
[[Category: Cunningham, K.]]
</StructureSection>
[[Category: Forouhar, F F.]]
[[Category: Halobacterium salinarum NRC-1]]
[[Category: Hunt, J F.]]
[[Category: Large Structures]]
[[Category: Janjua, H.]]
[[Category: Acton TB]]
[[Category: Jayaraman, S.]]
[[Category: Benach J]]
[[Category: Ma, L C.]]
[[Category: Cunningham K]]
[[Category: Montelione, G T.]]
[[Category: Forouhar FF]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Hunt JF]]
[[Category: Tong, L.]]
[[Category: Janjua H]]
[[Category: Wang, D.]]
[[Category: Jayaraman S]]
[[Category: Xiao, R.]]
[[Category: Ma L-C]]
[[Category: Zhou, W.]]
[[Category: Montelione GT]]
[[Category: hsr14]]
[[Category: Tong L]]
[[Category: nesg]]
[[Category: Wang D]]
[[Category: northeast structural genomics consortium]]
[[Category: Xiao R]]
[[Category: protein structure initiative]]
[[Category: Zhou W]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:26:38 2008''

Latest revision as of 03:58, 21 November 2024

Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14

Structural highlights

2gf4 is a 2 chain structure with sequence from Halobacterium salinarum NRC-1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.07Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gf4, resolution 2.07Å

Drag the structure with the mouse to rotate

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OCA
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