1vkc: Difference between revisions

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-[[Image:1vkc.jpg|left|200px]]
- {{Structure
+==Putative acetyl transferase from Pyrococcus furiosus==
-|PDB= 1vkc |SIZE=350|CAPTION= <scene name='initialview01'>1vkc</scene>, resolution 1.89&Aring;
+<StructureSection load='1vkc' size='340' side='right'caption='[[1vkc]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>
+<table><tr><td colspan='2'>[[1vkc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VKC FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00583 Acetyltransf_1]</span>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vkc OCA], [https://pdbe.org/1vkc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vkc RCSB], [https://www.ebi.ac.uk/pdbsum/1vkc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vkc ProSAT], [https://www.topsan.org/Proteins/SECSG/1vkc TOPSAN]</span></td></tr>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vkc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vkc OCA], [http://www.ebi.ac.uk/pdbsum/1vkc PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1vkc RCSB]</span>
+</table>
-}}
+== Function ==
+[https://www.uniprot.org/uniprot/Q8U4Q2_PYRFU Q8U4Q2_PYRFU]
-'''Putative acetyl transferase from Pyrococcus furiosus'''
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-==About this Structure==
+  <jmolCheckbox>
-VKC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKC OCA].
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vk/1vkc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vkc ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pyrococcus furiosus]]
-[[Category: Single protein]]
+[[Category: Adams MWW]]
-[[Category: Adams, M W.W.]]
+[[Category: Brereton PS]]
-[[Category: Brereton, P S.]]
+[[Category: Habel JE]]
-[[Category: Habel, J E.]]
+[[Category: Izumi M]]
-[[Category: II, F L.Poole.]]
+[[Category: Jenney Jr FE]]
-[[Category: Izumi, M.]]
+[[Category: Liu Z-J]]
-[[Category: Jr, F E.Jenney.]]
+[[Category: Poole II FL]]
-[[Category: Liu, Z J.]]
+[[Category: Richardson DC]]
-[[Category: Richardson, D C.]]
+[[Category: Richardson JS]]
-[[Category: Richardson, J S.]]
+[[Category: Rose JP]]
-[[Category: Rose, J P.]]
+[[Category: Shah C]]
-[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+[[Category: Sugar FJ]]
-[[Category: Shah, C.]]
+[[Category: Tempel W]]
-[[Category: Sugar, F J.]]
+[[Category: Wang B-C]]
-[[Category: Tempel, W.]]
-[[Category: Wang, B C.]]
-[[Category: acetyl transferase]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: pyrococcus furiosus]]
-[[Category: secsg]]
-[[Category: southeast collaboratory for structural genomic]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:09:56 2008''