1sfx: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1sfx.gif|left|200px]]


{{Structure
==X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus==
|PDB= 1sfx |SIZE=350|CAPTION= <scene name='initialview01'>1sfx</scene>, resolution 1.55&Aring;
<StructureSection load='1sfx' size='340' side='right'caption='[[1sfx]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1sfx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SFX FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
|GENE= AF2008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5625 COG5625]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sfx OCA], [https://pdbe.org/1sfx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sfx RCSB], [https://www.ebi.ac.uk/pdbsum/1sfx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sfx ProSAT], [https://www.topsan.org/Proteins/MCSG/1sfx TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1sfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sfx OCA], [http://www.ebi.ac.uk/pdbsum/1sfx PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1sfx RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/O28271_ARCFU O28271_ARCFU]
'''X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
1SFX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFX OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sf/1sfx_consurf.spt"</scriptWhenChecked>
[[Category: Archaeoglobus fulgidus]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Cymborowski, M.]]
  </jmolCheckbox>
[[Category: Edwards, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sfx ConSurf].
[[Category: Joachimiak, A.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Minor, W.]]
</StructureSection>
[[Category: Osipiuk, J.]]
[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: Savchenko, A.]]
[[Category: Large Structures]]
[[Category: Skarina, T.]]
[[Category: Cymborowski M]]
[[Category: conserved hypothetical protein]]
[[Category: Edwards A]]
[[Category: hth motif]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Minor W]]
[[Category: midwest center for structural genomic]]
[[Category: Osipiuk J]]
[[Category: protein structure initiative]]
[[Category: Savchenko A]]
[[Category: psi]]
[[Category: Skarina T]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:04:53 2008''

Latest revision as of 03:28, 21 November 2024

X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidusX-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus

Structural highlights

1sfx is a 2 chain structure with sequence from Archaeoglobus fulgidus DSM 4304. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.55Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O28271_ARCFU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1sfx, resolution 1.55Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA