2c20: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==CRYSTAL STRUCTURE OF UDP-GLUCOSE 4-EPIMERASE==
-<StructureSection load='2c20' size='340' side='right' caption='[[2c20]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+<StructureSection load='2c20' size='340' side='right'caption='[[2c20]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2c20]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_(strain_ames) Bacillus anthracis (strain ames)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C20 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C20 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2c20]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._Ames Bacillus anthracis str. Ames]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C20 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C20 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/UDP-glucose_4-epimerase UDP-glucose 4-epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.2 5.1.3.2] </span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c20 OCA], [http://pdbe.org/2c20 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c20 RCSB], [http://www.ebi.ac.uk/pdbsum/2c20 PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c20 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c20 OCA], [https://pdbe.org/2c20 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c20 RCSB], [https://www.ebi.ac.uk/pdbsum/2c20 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c20 ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A0A6L8PTV5_BACAN A0A6L8PTV5_BACAN]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/2c20_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/2c20_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c20 ConSurf].
 <div style="clear:both"></div>
@@ Line 22: / Line 25: @@
 __TOC__
 </StructureSection>
-[[Category: UDP-glucose 4-epimerase]]
+[[Category: Bacillus anthracis str. Ames]]
-[[Category: Blagova, E V]]
+[[Category: Large Structures]]
-[[Category: Brannigan, J A]]
+[[Category: Blagova EV]]
-[[Category: Fogg, M J]]
+[[Category: Brannigan JA]]
-[[Category: Lebedev, A A]]
+[[Category: Fogg MJ]]
-[[Category: Levdikov, V M]]
+[[Category: Lebedev AA]]
-[[Category: Moroz, O V]]
+[[Category: Levdikov VM]]
-[[Category: Wilkinson, A J]]
+[[Category: Moroz OV]]
-[[Category: Wilson, K S]]
+[[Category: Wilkinson AJ]]
-[[Category: Carbohydrate metabolism]]
+[[Category: Wilson KS]]
-[[Category: Galactose metabolism]]
-[[Category: Isomerase]]
-[[Category: Nad]]
-[[Category: Spine]]