1t3v: Difference between revisions

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-[[Image:1t3v.jpg|left|200px]]
- {{Structure
+==The NMR solution structure of TM1816==
-|PDB= 1t3v |SIZE=350|CAPTION= <scene name='initialview01'>1t3v</scene>
+<StructureSection load='1t3v' size='340' side='right'caption='[[1t3v]]' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND=
+<table><tr><td colspan='2'>[[1t3v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T3V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T3V FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-|GENE= TM1816 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t3v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t3v OCA], [https://pdbe.org/1t3v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t3v RCSB], [https://www.ebi.ac.uk/pdbsum/1t3v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t3v ProSAT], [https://www.topsan.org/Proteins/JCSG/1t3v TOPSAN]</span></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00851 MTH1175]</span>
+</table>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t3v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t3v OCA], [http://www.ebi.ac.uk/pdbsum/1t3v PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1t3v RCSB]</span>
+== Function ==
-}}
+[https://www.uniprot.org/uniprot/Q9X2D6_THEMA Q9X2D6_THEMA]
+== Evolutionary Conservation ==
-'''The NMR solution structure of TM1816'''
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
-==About this Structure==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t3/1t3v_consurf.spt"</scriptWhenChecked>
-T3V is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T3V OCA].
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==Reference==
+  </jmolCheckbox>
-NMR structure determination of the conserved hypothetical protein TM1816 from Thermotoga maritima., Columbus L, Peti W, Etezady-Esfarjani T, Herrmann T, Wuthrich K, Proteins. 2005 Aug 15;60(3):552-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15937903 15937903]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t3v ConSurf].
-[[Category: Single protein]]
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Columbus, L.]]
+[[Category: Columbus L]]
-[[Category: Etazady, T.]]
+[[Category: Etazady T]]
-[[Category: Herrmann, T.]]
+[[Category: Herrmann T]]
-[[Category: JCSG, Joint Center for Structural Genomics.]]
+[[Category: Klock H]]
-[[Category: Klock, H.]]
+[[Category: Lesley S]]
-[[Category: Lesley, S.]]
+[[Category: Peti W]]
-[[Category: Peti, W.]]
+[[Category: Wuthrich K]]
-[[Category: Wuthrich, K.]]
-[[Category: alpha-beta]]
-[[Category: jcsg]]
-[[Category: joint center for structural genomic]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Mar 25 23:25:47 2008''