1ueb: Difference between revisions

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OCA

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 ==Crystal structure of translation elongation factor P from Thermus thermophilus HB8==
-<StructureSection load='1ueb' size='340' side='right' caption='[[1ueb]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
+<StructureSection load='1ueb' size='340' side='right'caption='[[1ueb]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1ueb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UEB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UEB FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1ueb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UEB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UEB FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ueb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ueb OCA], [http://pdbe.org/1ueb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ueb RCSB], [http://www.ebi.ac.uk/pdbsum/1ueb PDBsum], [http://www.topsan.org/Proteins/RSGI/1ueb TOPSAN]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ueb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ueb OCA], [https://pdbe.org/1ueb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ueb RCSB], [https://www.ebi.ac.uk/pdbsum/1ueb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ueb ProSAT], [https://www.topsan.org/Proteins/RSGI/1ueb TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/EFP_THET8 EFP_THET8]] Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity).
+[https://www.uniprot.org/uniprot/EFP_THET8 EFP_THET8] Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ue/1ueb_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ue/1ueb_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ueb ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 28: / Line 30: @@
 ==See Also==
-*[[Elongation factor|Elongation factor]]
+*[[Elongation factor 3D structures|Elongation factor 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Flavobacterium thermophilum yoshida and oshima 1971]]
+[[Category: Large Structures]]
-[[Category: Hanawa-Suetsugu, K]]
+[[Category: Thermus thermophilus]]
-[[Category: Hori-Takemoto, C]]
+[[Category: Hanawa-Suetsugu K]]
-[[Category: Kuramitsu, S]]
+[[Category: Hori-Takemoto C]]
-[[Category: Structural genomic]]
+[[Category: Kuramitsu S]]
-[[Category: Sakai, H]]
+[[Category: Sakai H]]
-[[Category: Sekine, S]]
+[[Category: Sekine S]]
-[[Category: Shirouzu, M]]
+[[Category: Shirouzu M]]
-[[Category: Terada, T]]
+[[Category: Terada T]]
-[[Category: Yokoyama, S]]
+[[Category: Yokoyama S]]
-[[Category: Beta barrel]]
-[[Category: Rna binding protein]]
-[[Category: Rsgi]]