User:Stephen Mills/Sandbox 4 Secondary Structure: Helices XU: Difference between revisions

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New page: '''Bold text'''==The α-helix== α-helices are the most common type of regular helix found in proteins. They are characterized by the following helix parameters: ::Dihedral angles: Φ ~ -...
 
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'''Bold text'''==The α-helix==
==The α-helix==


α-helices are the most common type of regular helix found in proteins. They are characterized by the following helix parameters:
α-helices are the most common type of regular helix found in proteins. They are characterized by the following helix parameters:
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The helix shown below is a 19 amino acid chain in α-helical conformation.  
The helix shown below is a 19 amino acid chain in α-helical conformation.  
<Structure load='Tut_alpha_helix.pdb' size='500' frame='true' align='left' caption='' scene='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_load/1' name='initial_alpha_helix'/>
<Structure load='Tut_alpha_helix_XU.pdb' size='500' frame='true' align='left' caption='' scene='71/711023/Initial_alpha_helix/1' />


All the atoms are shown in this initial orientation (C = green; N = blue; O = red; S = yellow; H = white). The helix axis runs vertically, approximately parallel to the plane of the screen.<br/>
All the atoms are shown in this initial orientation (C = green; N = blue; O = red; S = yellow; H = white). The helix axis runs vertically, approximately parallel to the plane of the screen.<br/>
<Structure load='' size='350' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />