4xps: Difference between revisions

No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase complexed with p-nitrophenyl-alpha-galactopyranoside==
==Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase complexed with p-nitrophenyl-alpha-galactopyranoside==
<StructureSection load='4xps' size='340' side='right' caption='[[4xps]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='4xps' size='340' side='right'caption='[[4xps]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4xps]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XPS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XPS FirstGlance]. <br>
<table><tr><td colspan='2'>[[4xps]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudopedobacter_saltans Pseudopedobacter saltans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XPS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=NPO:P-NITROPHENOL'>NPO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4xpo|4xpo]], [[4xpp|4xpp]], [[4xpq|4xpq]], [[4xpr|4xpr]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=NPO:P-NITROPHENOL'>NPO</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-galactosidase Alpha-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.22 3.2.1.22] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xps FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xps OCA], [https://pdbe.org/4xps PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xps RCSB], [https://www.ebi.ac.uk/pdbsum/4xps PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xps ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xps FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xps OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4xps RCSB], [http://www.ebi.ac.uk/pdbsum/4xps PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0F7R6D6_9SPHI A0A0F7R6D6_9SPHI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4xps" style="background-color:#fffaf0;"></div>
==See Also==
*[[Alpha-glucosidase 3D structures|Alpha-glucosidase 3D structures]]
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Alpha-galactosidase]]
[[Category: Large Structures]]
[[Category: Ichikawa, M]]
[[Category: Pseudopedobacter saltans]]
[[Category: Ishizaki, Y]]
[[Category: Ichikawa M]]
[[Category: Miyazaki, T]]
[[Category: Ishizaki Y]]
[[Category: Nishikawa, A]]
[[Category: Miyazaki T]]
[[Category: Tonozuka, T]]
[[Category: Nishikawa A]]
[[Category: Gh31]]
[[Category: Tonozuka T]]
[[Category: Hydrolase]]
[[Category: Tim-barrel]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA