4z3b: Difference between revisions

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New page: '''Unreleased structure''' The entry 4z3b is ON HOLD Authors: Fujita, K., Tanaka, Y., Abe, S., Ueno, T. Description: Crystal structure of MnCO/apo-R52CFr [[Category: Unreleased Structu...
 
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'''Unreleased structure'''


The entry 4z3b is ON HOLD
==Crystal structure of MnCO/apo-R52CFr==
<StructureSection load='4z3b' size='340' side='right'caption='[[4z3b]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4z3b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Z3B FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.42&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4z3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z3b OCA], [https://pdbe.org/4z3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4z3b RCSB], [https://www.ebi.ac.uk/pdbsum/4z3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4z3b ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FRIL_HORSE FRIL_HORSE] Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney (By similarity).
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Protein cages can serve as bioinorganic molecular templates for functionalizing metal compounds to regulate cellular signaling. We succeeded in developing a photoactive CO-releasing system by constructing a composite of ferritin (Fr) containing manganese-carbonyl complexes. When Arg52 adjacent to Cys48 of Fr is replaced with Cys, the Fr mutant stabilizes the retention of 48 Mn-carbonyl moieties, which can release the CO ligands under light irradiation, although wild-type Fr retains very few Mn moieties. The amount of released CO is regulated by the extent of irradiation. This could reveal an optimized dose for cooperatively activating the nuclear factor kappaB (NF-kappaB) in mammalian cells and the tumor necrosis factor alpha (TNF-alpha). These results suggest that construction of a CO-releasing protein cage will advance of research in CO biology.


Authors: Fujita, K., Tanaka, Y., Abe, S., Ueno, T.
A Photoactive Carbon-Monoxide-Releasing Protein Cage for Dose-Regulated Delivery in Living Cells.,Fujita K, Tanaka Y, Abe S, Ueno T Angew Chem Int Ed Engl. 2015 Sep 2. doi: 10.1002/anie.201506738. PMID:26332099<ref>PMID:26332099</ref>


Description: Crystal structure of MnCO/apo-R52CFr
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Fujita, K]]
<div class="pdbe-citations 4z3b" style="background-color:#fffaf0;"></div>
[[Category: Abe, S]]
 
[[Category: Ueno, T]]
==See Also==
[[Category: Tanaka, Y]]
*[[Ferritin 3D structures|Ferritin 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Equus caballus]]
[[Category: Large Structures]]
[[Category: Abe S]]
[[Category: Fujita K]]
[[Category: Tanaka Y]]
[[Category: Ueno T]]

Latest revision as of 18:42, 8 November 2023

Crystal structure of MnCO/apo-R52CFrCrystal structure of MnCO/apo-R52CFr

Structural highlights

4z3b is a 1 chain structure with sequence from Equus caballus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.42Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FRIL_HORSE Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney (By similarity).

Publication Abstract from PubMed

Protein cages can serve as bioinorganic molecular templates for functionalizing metal compounds to regulate cellular signaling. We succeeded in developing a photoactive CO-releasing system by constructing a composite of ferritin (Fr) containing manganese-carbonyl complexes. When Arg52 adjacent to Cys48 of Fr is replaced with Cys, the Fr mutant stabilizes the retention of 48 Mn-carbonyl moieties, which can release the CO ligands under light irradiation, although wild-type Fr retains very few Mn moieties. The amount of released CO is regulated by the extent of irradiation. This could reveal an optimized dose for cooperatively activating the nuclear factor kappaB (NF-kappaB) in mammalian cells and the tumor necrosis factor alpha (TNF-alpha). These results suggest that construction of a CO-releasing protein cage will advance of research in CO biology.

A Photoactive Carbon-Monoxide-Releasing Protein Cage for Dose-Regulated Delivery in Living Cells.,Fujita K, Tanaka Y, Abe S, Ueno T Angew Chem Int Ed Engl. 2015 Sep 2. doi: 10.1002/anie.201506738. PMID:26332099[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Fujita K, Tanaka Y, Abe S, Ueno T. A Photoactive Carbon-Monoxide-Releasing Protein Cage for Dose-Regulated Delivery in Living Cells. Angew Chem Int Ed Engl. 2015 Sep 2. doi: 10.1002/anie.201506738. PMID:26332099 doi:http://dx.doi.org/10.1002/anie.201506738

4z3b, resolution 1.42Å

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